Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0459 ATGAGAAACTCTTCATTAGATGAGGCTTTTAAGAGAGAGGACCCCTTATCATCATCACAACTAAAACCAACAAGTTCTTATTATTCTTCTTCTTCTAATTCCTACATTATTTCTTTTGGCAATAATGAGGTGAAGAAGTTTGAATATGATTTAGCCTTGAAGCCCAAAACCAAATTAGTAAATAATAATAATTATTTGAAATCTTGGCCTTCACGAAAAATTCATGAGGGAATAGAGATAGTGAGAAGAACACCTTATCATGCTTATTATCATACAATTGCTGAGAGAATGAGGAGAGAAAAGATTAGCCAGCACTTCATAGCCCTTTCTGCTCTTATTCCAGGCCTGAAAAAGATGGATAAGGCCTCAGTGTTGGAGGATACAATAAAGTATGTGAAGCATTTAGAAGAGCAAGTGAAACAGCTTGAGGAACAGAGCAAAAGTAAAGGCACAGAATCAGTGGTGTGTGTGAAGAAATCTCAGCCAGCAGATCAGGATCACGAATGTGATGTCGCAGACAGCTCTTCAAATAATTTATGTGACTCAACAAACTGCGATGATTGTTCCATAACAAAGCTGTCACTGCCAGAAGTTGAAACGAGGGTGTCGGAGAAGAGCGTTCTGATCCGAATCCGATGTGAGAAGAAACAAAATGCAGAGTTAGCAAACATTGTTCAAGAGATAGAGAAACTTCATCTCTCTGTTGTTAATAGTAATGCCTTGATTTTCGGATCCTCTGTTCTACTCAACCATCGTCGCCCAGGCGCAAGCACCTTCACAGCCATCACCTCTCCCATAGCCATTCTGGCTTTATAA 816 0.3934 MRNSSLDEAFKREDPLSSSQLKPTSSYYSSSSNSYIISFGNNEVKKFEYDLALKPKTKLVNNNNYLKSWPSRKIHEGIEIVRRTPYHAYYHTIAERMRREKISQHFIALSALIPGLKKMDKASVLEDTIKYVKHLEEQVKQLEEQSKSKGTESVVCVKKSQPADQDHECDVADSSSNNLCDSTNCDDCSITKLSLPEVETRVSEKSVLIRIRCEKKQNAELANIVQEIEKLHLSVVNSNALIFGSSVLLNHRRPGASTFTAITSPIAILAL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0459 271 Gene3D - 89 154 IPR036638 GO:0046983
Aev01g0459 271 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 20 248 - -
Aev01g0459 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 150 IPR036638 GO:0046983
Aev01g0459 271 Coils Coil 125 152 - -
Aev01g0459 271 Pfam Helix-loop-helix DNA-binding domain 91 136 IPR011598 GO:0046983
Aev01g0459 271 MobiDBLite consensus disorder prediction 1 15 - -
Aev01g0459 271 SMART finulus 92 141 IPR011598 GO:0046983
Aev01g0459 271 PANTHER BHLH TRANSCRIPTION FACTOR 20 248 - -
Aev01g0459 271 Coils Coil 211 231 - -
Aev01g0459 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 135 IPR011598 GO:0046983
Aev01g0459 271 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0459 Aev-Chr1 4061535 4066299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0459 83 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.303 7.32e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g0459 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0459 - - gmx:100803386 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0772 05 5394382 5397068 Aev01g0459 01 4061535 4066299 PCT