Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0457 ATGTGGAATCATAGGAAACACCAAGAAGTATTAGAAGATGATGAGGACTCATGGGAGGTCAGGGCCTTTGCAGAGGACACAAGGAACATCATGGCCACCACTTGGCCTCCAAAGTCCTACTCCTGCAGCTTCTGCAGGAGGGAGTTTCGGTCCGCCCAGGCTCTGGGCGGACACATGAATGTCCACCGTCATGACCGCGCTCGCCTCCAACACCACCCTCACCACCAACAACCTCTCCCTCCTACCGCCATTGCGGTCCCCGCCTCCTCGCCAAATCCCATCACCACCCCATCATCATCCTCTCATCCCACTAGACTCCCAAATCATCATCAAGAGCTTATTAGTGTTGCAAATGGTAATGATGGGTTGCGCCTCTTTTACCATATTCCAAACCCTAATAATAATGATAACACTCACATTAACTATGCTCCTTTCTCCATTACACATCATCATCATGAACACAACACTGCTAACACTCCTTTAATGAGTGGGTGTAATAAATTACCATGCTCCACTACTACTACTTCTACTCTTGTCTCTATCTCATCCCACCCACCAAATCACAATTTGGTAGTGAGGCCAACTTGTTCACCTTCCTTCAATTTGGCTATGGGTCAAGGGGCATATGGGACCAACGGTTTTTCTTCCACCAAAGCTGAAGAATCCTCGTCAAGCTCTCGTGGCTATTGCCACGACGAGCTTGATCTGGAGCTACGCTTGGGGCGTAAATCACCTCATCAGAATGGAAATAAGAAGAATGATTGA 765 0.481 MWNHRKHQEVLEDDEDSWEVRAFAEDTRNIMATTWPPKSYSCSFCRREFRSAQALGGHMNVHRHDRARLQHHPHHQQPLPPTAIAVPASSPNPITTPSSSSHPTRLPNHHQELISVANGNDGLRLFYHIPNPNNNDNTHINYAPFSITHHHHEHNTANTPLMSGCNKLPCSTTTTSTLVSISSHPPNHNLVVRPTCSPSFNLAMGQGAYGTNGFSSTKAEESSSSSRGYCHDELDLELRLGRKSPHQNGNKKND* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0457 254 SMART c2h2final6 40 62 IPR013087 -
Aev01g0457 254 Pfam C2H2-type zinc finger 40 63 - -
Aev01g0457 254 ProSitePatterns Zinc finger C2H2 type domain signature. 42 64 IPR013087 -
Aev01g0457 254 Gene3D Classic Zinc Finger 31 82 - -
Aev01g0457 254 PANTHER OS07G0101800 PROTEIN 6 243 - -
Aev01g0457 254 SUPERFAMILY beta-beta-alpha zinc fingers 37 67 IPR036236 -
Aev01g0457 254 PANTHER OS07G0101800 PROTEIN 6 243 - -
Aev01g0457 254 MobiDBLite consensus disorder prediction 69 107 - -
Aev01g0457 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Aev01g0457 254 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0457 Aev-Chr1 4031043 4031807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0457 1 134 C2H2 Transcription Factor Family AT4G17810 48.889 1.34e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0457 - - adu:107487554 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0775 05 5426949 5427740 Aev01g0457 01 4031043 4031807 PCT