Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0456 ATGGCTGGTTTGGATTTAGGAACAGCATCGCGCTTCGTTCAAAATCTCCACAACAGAACAGATTTTCACCTTCAAGTTCAAAACCACCACACACCGAATCCTGCGCCGCAATTCTCCGCCGAAGAAGACGATGATCCCAGCCAAGGCGGCGGCGGATCCGGCAGCGACGTCGTCGGCCGCCGTCCACGTGGCAGGCCACCAGGATCTAAAAACAAGCCGAAGCCGCCGGTTATCATCACCAGAGAGAGCGCCAACACATTGAGAGCTCACATCTTAGAAATCGCCACCGGCTCCGACGTTTTCGACAGCGTCGCCGTCTACGCGCGGCGGCGTCAGCGCGGGATCTGTGTTTTAAGCGGAAGCGGCACCGTCACCAATGTAACTCTCCGGCAGCCTGCGGCTGCCGGAGCCGTCGTGACACTCCACGGAAGATTCGAGATTCTCTCTCTTTCCGGCTCGTTCCTTCCGCCGCCAGCTCCTCCCGGCGCGACGAGCCTCACGATTTACCTCGCCGGCGGCCAGGGACAGGTCGTCGGAGGTAGCGTCGTCGGAGAGTTGACGGCGGCCGGACCGGTTATCGTCATCGCGGCGTCGTTCACGAACGTTGCTTACGAGCGGCTGCCGCTGCAGGAGGAGGAGGAAGATCAGCAGGTTCAGATGCAGCCGACGGCGACGGCCGCCGGAGGATCTCAAAGCTCCGCCGCAGACGGCGGTGTTGGGAGCAACAATAATAACAACCCCTTTCCTGACCCTTCGTCTGGTTTACCGTTCTTCAATTTGCCACTTGGAATGCAGAATGTTCAGTTACCTTTGGATGGTACTGCTTGGGCGGGAAACTCTGGTACTGCACGCCCTCCATTTTAA 864 0.5891 MAGLDLGTASRFVQNLHNRTDFHLQVQNHHTPNPAPQFSAEEDDDPSQGGGGSGSDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIATGSDVFDSVAVYARRRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLQEEEEDQQVQMQPTATAAGGSQSSAADGGVGSNNNNNPFPDPSSGLPFFNLPLGMQNVQLPLDGTAWAGNSGTARPPF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0456 287 MobiDBLite consensus disorder prediction 27 77 - -
Aev01g0456 287 PIRSF ESCAROLA 6 287 IPR014476 GO:0003680
Aev01g0456 287 Gene3D - 87 220 - -
Aev01g0456 287 MobiDBLite consensus disorder prediction 211 259 - -
Aev01g0456 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
Aev01g0456 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 271 IPR014476 GO:0003680
Aev01g0456 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 271 - -
Aev01g0456 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 214 - -
Aev01g0456 287 MobiDBLite consensus disorder prediction 214 252 - -
Aev01g0456 287 ProSiteProfiles PPC domain profile profile. 84 221 IPR005175 -
Aev01g0456 287 CDD DUF296 88 171 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0456 Aev-Chr1 3984812 3985675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0456 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 62.701 3.06e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0456 - - pvu:PHAVU_003G230600g 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0776 05 5447569 5448414 Aev01g0456 01 3984812 3985675 PCT