Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0450 ATGGGTTGCACTGTGAGAGAAAAACACATAAGAGCAAATCGAAGACCCAGATCAACATCGAAACCCGATTCAGATTCTTGCGATAGGGACCCAATATCGAAATCCATAGCCGAGTCTGGCCTCAAGCCTCTGAAATACCATGTGGGACCCAACGATGCTCCTCAGAACCCGAATCCGAATCCGAACCCTAACAATAACAGCGTCGATGAAACTGGGTGGGGTTACTGCACGGAGGAACAATTGGAGGAGATCCTGTTGAAGAATCTCGAATTCGTGTACAACGAGGCGGTTTCGAAGCTCGTTGCTTTGGGTTACGATGAGGACGTTGCGGTGAAGGCTATATTGAGGAATGGGCATTGCTATGGTGGAATGGATGTTCTCACGAATATATTGCACAATTCCTTGGCGTTCTTGAATAGTAATGTTGGTGGTGGTGGTGGTGGGAATTGTGACGAGAGTGAGGTTGTGTTCACTGATTTGAGGCAGTTGGAGGAGTACTCTCTGGCGGGTATGGTGTGTTTGTTGCAGCAAGTGAGGCCTAATTTGACCAAAGGTGATGCCATGTGGTGCTTGCTAATGAGTGATCTTCATGTTGGTAGGGCCAGCACTATGGAGATTCCGGTGCCGGGGAATGGGTACCCTGCTTCTGCGGCCGCGGTGACGTCGACGACGGTTGAGGCCGGTGGTGGTGGTGGTGGTGGTTCTAATTCGGTTGGTGTTATGGCTCCTGCTTTGTGTAGGTTTCATGGTGGTTGGGGATTTGGGAATGGTGGTGGGGGCTTGGAATTTCAGACTACTGGGATGTTCTCATATGGTGCTGAGATGAATTTGCAGCTGCAGAAGGATATTGAATTCCCAAAGAGGTTTAACCTTTCGCCTTCGATGAAGTCGTTGTTGAAGAGGAATGTTGCTGCCTTTGCTGCTGGTTTTAGGGCGAATTCGAAACAGTTGCAGACTCCGGCTCAGGTGAAGGCCTTTTCTAGCAGTGGCACGGTGCCGAATTTGGATCCTCCTGCAGAAGTTTCTGGTGAGCAGCAGCCTGCAGATTCTCATAATATTGATAATCAAGATGCTGTGAACTCGGTGTTGAGTAAATTCCGTGACCTGAATCTTGATGAGAACTTGGAGCTTGTTGCGGAGGATCAGAAGGATGAGTTGATTGTCAACTTGTTTCATCAGATCAAGGATCTCGAGAAGCAGGTAAAGGAGCGAAAAGATTGGGCTCATCAGAAGGCAATGCAAGCTGCGAGGAAGCTTAGTGGTGATCTGACTGAGCTCAAAACACTGAGGATGGAAAGAGAGGAGAATCAGCGATTGAAGAAAGGGAAACAGGCGCTTGAGGACACGACGATGAAGAGGCTCTCGGAGATGGAGAATGCTCTGAGGAAGGCTAGTGGTCAAGTGGACCGTGCCAATGCAGCCGTGAGGAGGTTGGAAACGGAGAATGCTGAGATCAAAGCTGAGATGGAGGCTTCAAAGTTAAGTGCATCAGAGTCAGTGACAGCTTGCTTAGAAGTCGCAAAAAGGGAGAAAAAATGCTTGAAGAAGCTTCTTGCTTGGGAGAAGCAGAAAGCTAAGTTACAGCAGGAGATTTCTGATGAGAAAGCCAAGATATTGGAGACACAAGAGTTGTTGGTTCAGATTCGACAAAGCCAACAAGAAGCTGAGGTCAAGTGGAAGGAAGAGCTGAAGGGTAAAGAGGAAGCCATAGGACTAGTCGAGGAGGAACGCCGTTCCAAGGAAGCAGCCGAGTCCAACAACAAGAGGAAGCTCGAGGCTCTACGCCTGAAGATCGAGATCGATTTCCAGCGGCACAAGGACGATCTACTCCGACTCGAGCAGGAGCTTTCACGCCTCAAAGCATCAGCACAGTCTGCCGAGCTCCAAAATCAATCAAACACTTCCCCCGAAGGCGAGTCCGAGGGTCCAACGCCTCAGAGAGATACAATCGCGAAGCTGCTCCAAGAACTCGACAATCTAGAGGATTATTCTGAGAAGGAAGTTAGTGGAAACAGGGAATGCATTATATGCATGAAAGATGAAGTATCCATTGTTTTCTTGCCATGTGCACACCAAGTTATGTGTGCTGGTTGTGGTGATGAGTATGGAAGAAAAGGAAAAGCTGCATGCCCTTGTTGCAGGGTTCCAATTCAACAGAGAATCCGTGTATTTGGGGCAAGTTCATAG 2187 0.4861 MGCTVREKHIRANRRPRSTSKPDSDSCDRDPISKSIAESGLKPLKYHVGPNDAPQNPNPNPNPNNNSVDETGWGYCTEEQLEEILLKNLEFVYNEAVSKLVALGYDEDVAVKAILRNGHCYGGMDVLTNILHNSLAFLNSNVGGGGGGNCDESEVVFTDLRQLEEYSLAGMVCLLQQVRPNLTKGDAMWCLLMSDLHVGRASTMEIPVPGNGYPASAAAVTSTTVEAGGGGGGGSNSVGVMAPALCRFHGGWGFGNGGGGLEFQTTGMFSYGAEMNLQLQKDIEFPKRFNLSPSMKSLLKRNVAAFAAGFRANSKQLQTPAQVKAFSSSGTVPNLDPPAEVSGEQQPADSHNIDNQDAVNSVLSKFRDLNLDENLELVAEDQKDELIVNLFHQIKDLEKQVKERKDWAHQKAMQAARKLSGDLTELKTLRMEREENQRLKKGKQALEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVTACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEKAKILETQELLVQIRQSQQEAEVKWKEELKGKEEAIGLVEEERRSKEAAESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELQNQSNTSPEGESEGPTPQRDTIAKLLQELDNLEDYSEKEVSGNRECIICMKDEVSIVFLPCAHQVMCAGCGDEYGRKGKAACPCCRVPIQQRIRVFGASS* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0450 728 MobiDBLite consensus disorder prediction 1 72 - -
Aev01g0450 728 Coils Coil 510 544 - -
Aev01g0450 728 MobiDBLite consensus disorder prediction 16 32 - -
Aev01g0450 728 MobiDBLite consensus disorder prediction 622 642 - -
Aev01g0450 728 ProSiteProfiles Zinc finger RING-type profile. 674 714 IPR001841 -
Aev01g0450 728 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 727 - -
Aev01g0450 728 Coils Coil 429 449 - -
Aev01g0450 728 MobiDBLite consensus disorder prediction 622 646 - -
Aev01g0450 728 Pfam Zinc finger, C3HC4 type (RING finger) 671 719 - -
Aev01g0450 728 Pfam Family of unknown function (DUF6592) 88 202 IPR046527 -
Aev01g0450 728 MobiDBLite consensus disorder prediction 321 353 - -
Aev01g0450 728 SUPERFAMILY RING/U-box 655 720 - -
Aev01g0450 728 PANTHER OS05G0141500 PROTEIN 1 727 IPR046934 -
Aev01g0450 728 Coils Coil 454 495 - -
Aev01g0450 728 MobiDBLite consensus disorder prediction 321 335 - -
Aev01g0450 728 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 658 725 IPR013083 -
Aev01g0450 728 Coils Coil 602 629 - -
Aev01g0450 728 Coils Coil 566 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0450 Aev-Chr1 3919614 3924725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0450 674 724 C3H Transcription Factor Family AT1G73950 39.216 6.86e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0450 - - adu:107483267 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0782 05 5481592 5484701 Aev01g0450 01 3919614 3924725 PCT