Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0446 ATGGGAGGGGCATCACTGCCACCAGGATTTCGTTTCCATCCAACAGATGAAGAACTAATAGGATACTACCTTAAGAGGAAAGTGGAGGGGCTTGAAATTGAGCTTGAGGTTATCCCTGTCATTGATTTGTACAAGTTTGATCCATGGGAATTGCCTGAAAAATCTTTCTTGCCAAAAAGAGATTTGGAGTGGTTTTTCTTTTGTCCAAGGGACAGGAAATACCCAAATGGATCAAGAACAAACAGAGCTACAAAATCTGGGTACTGGAAAGCCACAGGAAAGGACAGAAAAGTTGTGTGTCAGGATTGTAGTCCTTTTATTACTGTCACAGGTTACCGCAAGACCCTTGTTTTTTACCGTGGGAGAGCACCTTTGGGTGATAGAACTGATTGGGTCATGCATGAGTATCGTCTCTGTCATGATCTTGCTCAAGATTCACCATGTTTTCAGGGTGGTTTTGCTCTGTGCCGAGTTATTAAGAAGAATGAGAAGGTAAGTGATTCACAAGGAGAAGAACACAAGACATCAATGAGATTCTCTAATGAGCCTTTAACCATATCTGCTGATGTTTCTTCTCAAACAAGTCACCTCAATAGTGAAAGTCATTATTCAAGCCCAATCACTTCTCCACACAATAATGTGGCTCCAATCGTAGACTCTAACCAAGCTTCCATGGATACAAATCCTTCAGACTTTTGGATCTCTCCTGAAATGATTCTTGACTCTTCAAAGGACTATCCTCAAGTACAAGATGCTTATCCTCAGTATGACTTACCAAATGCAATGACTTCATGGACATCAATGGATCACACAGAAATTTCTACTAGTTCATCATACTCAAATTATAACCGGGAAGTTGAATTCTCCGACGATCTCAGTCGAATCAGCTGCGTGTCGCCTTACTCGGCACAAGGAAATTTTATGGACTTTTATGGGAATGGAGATGTTCCTTGTGAAAATTATGATCAGATCAATTCAATTGGATATCCAAAATACTTCTTATAA 1005 0.403 MGGASLPPGFRFHPTDEELIGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKSGYWKATGKDRKVVCQDCSPFITVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCHDLAQDSPCFQGGFALCRVIKKNEKVSDSQGEEHKTSMRFSNEPLTISADVSSQTSHLNSESHYSSPITSPHNNVAPIVDSNQASMDTNPSDFWISPEMILDSSKDYPQVQDAYPQYDLPNAMTSWTSMDHTEISTSSSYSNYNREVEFSDDLSRISCVSPYSAQGNFMDFYGNGDVPCENYDQINSIGYPKYFL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0446 334 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 333 - -
Aev01g0446 334 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Aev01g0446 334 ProSiteProfiles NAC domain profile. 6 161 IPR003441 GO:0003677|GO:0006355
Aev01g0446 334 MobiDBLite consensus disorder prediction 189 221 - -
Aev01g0446 334 MobiDBLite consensus disorder prediction 165 184 - -
Aev01g0446 334 Pfam No apical meristem (NAM) protein 7 138 IPR003441 GO:0003677|GO:0006355
Aev01g0446 334 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 333 - -
Aev01g0446 334 SUPERFAMILY NAC domain 4 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0446 Aev-Chr1 3894540 3898449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0446 1 287 NAC Transcription Factor Family AT4G17980 57.483 1.32e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev01g0446 NAM 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0446 - - gmx:100792714 521.546