Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0429 ATGATAGAACCAGTAAAAATGGCGACTTTAGATTCATCGAGTTTCATTGCTTTAGCACCACCACCTCCTCCTCATCACCGTCGTCTTCTCTCAGCCACAAGCCACCGCGGCGCGCGTGCCTCAGTTGCTGTTCCTTCTTCTTCCCGGAAACTCACACTCTCTTCCAACACAGCATCAAGACGCCTCTTCATATGCTCTGCTTCGAATCTGCAACAACTTCCCACAAACGTTAAGAAACTGTACGTCTCTAACCTTCCATGGTCCCTCTCCCCAACCCACATCCAAACCCTCTTCTCTCAATGCGGAACTGTTACCGATGTCGAGGTGATAAGGAACAAAAATGGGCGAATCTCTGGCTTTGCCTTCGTTACCATGGCTTCTGCAGAAGAGGCTCAAGCTGCTATTCATAAATTACACTCTCATCAAATATCAGGCCAGACAATAAGGGTAGAGCTTGCAAAGAGATTTAAGAAACCTCGTCCTCCAGGCCCCTCTGCTGATGAGACCAACCATAAAGTTTTTGCATCCAATCTTGCTTGGAAAGTAAAAGCTGCCCATCTCAGAGAATTCTTCGCTACGAATTTTAAAAATCCGGTTTCAGCCAGGGTTGTGTTTGACAGTTCTTCCGGGACATGTGCTGGATATGGATTTGTTTCTTTTGTTACAAAGGAGGAAGCAGAGGATGCCATTTCTGCTTTGGATGGGAAGGAGTTAATGGGACGACCTGTTCGCCTACAATTTAGCCGAAAGACAGTTGAAGAAGCTGGCAATGACAAAGATGATGAGGAGCAAGCTGTGAACTATTCTCTGGAGAGGGACATTCTTAAGGTAAGTTTGGATTATACTATAATTAATTCTGAATCTGATAAGGAAGAAGAGGGATATGTTAATGTCAATGATGATGATGATGGATATGATGATTAG 924 0.4459 MIEPVKMATLDSSSFIALAPPPPPHHRRLLSATSHRGARASVAVPSSSRKLTLSSNTASRRLFICSASNLQQLPTNVKKLYVSNLPWSLSPTHIQTLFSQCGTVTDVEVIRNKNGRISGFAFVTMASAEEAQAAIHKLHSHQISGQTIRVELAKRFKKPRPPGPSADETNHKVFASNLAWKVKAAHLREFFATNFKNPVSARVVFDSSSGTCAGYGFVSFVTKEEAEDAISALDGKELMGRPVRLQFSRKTVEEAGNDKDDEEQAVNYSLERDILKVSLDYTIINSESDKEEEGYVNVNDDDDGYDD* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0429 307 SUPERFAMILY RNA-binding domain, RBD 77 249 IPR035979 GO:0003676
Aev01g0429 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 149 IPR000504 GO:0003723
Aev01g0429 307 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 173 243 IPR000504 GO:0003723
Aev01g0429 307 PANTHER CHLOROPLAST, PUTATIVE-RELATED 27 271 - -
Aev01g0429 307 Gene3D - 158 263 IPR012677 -
Aev01g0429 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 171 250 IPR000504 GO:0003723
Aev01g0429 307 PANTHER OS02G0815200 PROTEIN 27 271 - -
Aev01g0429 307 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 155 IPR000504 GO:0003723
Aev01g0429 307 CDD RRM_SF 80 151 - -
Aev01g0429 307 Gene3D - 55 157 IPR012677 -
Aev01g0429 307 SMART rrm1_1 79 151 IPR000504 GO:0003723
Aev01g0429 307 SMART rrm1_1 172 246 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0429 Aev-Chr1 3669367 3672324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0429 72 243 Eukaryotic Initiation Factors Gene Family AT3G16380 31.694 1.25e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0429 - - zju:107430550 260.766