Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0424 ATGGCTTTCTCTCTTTTGTGCCCTCTGCTTGCAACAGCCCTGCTTCTCATGCAAACTCTTGCAGATACTTCATGCACCGATTGTTTCGTTCAATCTCGAGCAGCATATTACCCAAACTCCGAAGTAAATGGCACAGACGCTGGTGCATGTGGATTTGGTTCTTTTGGTGCTACTGCCAATGGTGGGGACGTATCTGCTGCATCGAGTCTTTATCGGAATGGTGTTGGCTGTGGCGCCTGTTACCAGGTGAGGTGTACCAACACTACCTATTGCACAAGCAATGGTGTCACAGTAGTTATAACTGACCAAGGCTCAGGTGATAACACTGATTTCATTCTTAGTCAACGAGCCTTTGGTGGGATGGCTCAAAACTCTAACTCAGCTGCTTTTCTATTAGATCTTGGTATAGTTGATATCGAATACAGACGTGTTTCATGCAGCTACCCAAACACAAACATTACAATTAAGATAGATGAGAGCAGCAGTAACCCTAATTACCTCGCTTTTGTCATATGGTTTCAACAAGGACAGAGAGACATAACTGCTGTGCAGCTCTGTGAGACACAGAACTTTGTCTGCAAGTTACTGGACCGAAGTCATGGCGCAGTCTGGACTACTACTTCTGCACCTAGTGGACCATTGTCTTTAAGGATGCTGTTTAGTGCTGAAAATGGAGAAGAAACATGGGCTGTTCCTATTAATAACATACCCAAAGATTGGAAGGCCGGAGAAACATATGACTCAGGGATACAAGTGGACAAATAG 765 0.4458 MAFSLLCPLLATALLLMQTLADTSCTDCFVQSRAAYYPNSEVNGTDAGACGFGSFGATANGGDVSAASSLYRNGVGCGACYQVRCTNTTYCTSNGVTVVITDQGSGDNTDFILSQRAFGGMAQNSNSAAFLLDLGIVDIEYRRVSCSYPNTNITIKIDESSSNPNYLAFVIWFQQGQRDITAVQLCETQNFVCKLLDRSHGAVWTTTSAPSGPLSLRMLFSAENGEETWAVPINNIPKDWKAGETYDSGIQVDK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0424 254 SUPERFAMILY PHL pollen allergen 152 248 IPR036749 -
Aev01g0424 254 Gene3D - 148 252 IPR036749 -
Aev01g0424 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 151 IPR007112 -
Aev01g0424 254 SUPERFAMILY Barwin-like endoglucanases 16 150 IPR036908 -
Aev01g0424 254 Pfam Lytic transglycolase 67 141 IPR009009 -
Aev01g0424 254 PANTHER EXPANSIN-B3 9 253 - -
Aev01g0424 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 248 IPR007117 -
Aev01g0424 254 PANTHER POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED 9 253 - -
Aev01g0424 254 Pfam Expansin C-terminal domain 153 225 IPR007117 -
Aev01g0424 254 Gene3D - 17 147 IPR036908 -
Aev01g0424 254 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Aev01g0424 254 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Aev01g0424 254 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0424 Aev-Chr1 3637326 3639321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0424 1 250 Expansin Gene Family AT4G17030 41.434 8.26e-59 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0424 - - gmx:100794009 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0806 05 5623814 5625387 Aev01g0424 01 3637326 3639321 PCT