Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0395 ATGGAGCTTAATTTGAAGCACCAATTTGTCCTTGTTTGTGTCATACTACTCTTGCCTGTGCTCTGTAGCTCACAGGACTCTTTCACTGATTCCAGAGCAACCTATTATGGTAGCCCTGATTGCTATGGGAATCCAAAGGGAGCTTGTGGGTTTGGGGAATATGGAAGAACGGTGAACGATGGCAGTGTTTCTGGCGTTTCAAGGCTATGGAGGAATGGAAGTGGCTGTGGTGCATGCTACCAGGTAAGGTGCAAATTATCAGAATACTGCGATGAAAATGGAGCATACGTGGTCGTAACAGACTACGGCGAAGGAGACAGAACAGACTTCATCATGAGCCCACGCGCTTACTCGCGCTTGGGACGCACCGCCGATGCTTCTGCAGAGCTTTTCAAATACGGTGTGGTTGATATTGAGTTCAGAAGAGTAGCTTGCAGATATGAAGGGTACAACGTTGTGTTTAAGGTTCACGAACATAGCAGATTTCCAGAATATTTTGCTGTTGTGATTCTCTATGTTGGTGGAGCATACGATGTCAATGCTGTTCAGATGTGGCAGGAGGACTGCCAAGAATGGATGCCAATGAGGAGAGCTTTTGGGGCAGTGTTTGACTATGCCAACCCACCAAATGGTGAAATCAACTTGAGGTTCCAAGTAAGTGGCAGTACAGGTCTTTATTGGGTTCAGTCCAAGAATGCTATTCCTAGTGATTGGACTGCTGGAGCTACTTATGACTCCCAGGTTCAGCTTACTTAA 756 0.463 MELNLKHQFVLVCVILLLPVLCSSQDSFTDSRATYYGSPDCYGNPKGACGFGEYGRTVNDGSVSGVSRLWRNGSGCGACYQVRCKLSEYCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRTADASAELFKYGVVDIEFRRVACRYEGYNVVFKVHEHSRFPEYFAVVILYVGGAYDVNAVQMWQEDCQEWMPMRRAFGAVFDYANPPNGEINLRFQVSGSTGLYWVQSKNAIPSDWTAGATYDSQVQLT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0395 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Aev01g0395 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Aev01g0395 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Aev01g0395 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Aev01g0395 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Aev01g0395 251 SUPERFAMILY Barwin-like endoglucanases 13 149 IPR036908 -
Aev01g0395 251 Gene3D - 20 145 IPR036908 -
Aev01g0395 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Aev01g0395 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
Aev01g0395 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Aev01g0395 251 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Aev01g0395 251 Pfam Lytic transglycolase 64 139 IPR009009 -
Aev01g0395 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Aev01g0395 251 Gene3D - 146 247 IPR036749 -
Aev01g0395 251 PANTHER EXPANSIN-B3 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0395 Aev-Chr1 3331069 3334065 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0395 5 251 Expansin Gene Family AT4G17030 60.714 2.95e-114 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0395 - - gmx:100779487 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0834 05 5849939 5851381 Aev01g0395 01 3331069 3334065 PCT