Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0390 ATGGAGATTAAGCACAAACTTGGTCTTGTTTGCATGGTACTATTGTTACCTGCAATGTGCAGCGCCTATTTTACTAAATCCAGAGCAACCTTTTATAGCACCCCGGGTGGCTATGGCACTTCAACGGGAGCTTGTGGGTATGGGGACTATGGAAGTTCTGTGTATAATGGTCAGGTCGCAGGCGTCTCTGCACTTTGGAGAGATGGCAGTGGTTGTGGTGCATGTTACCAGGTAAAGTGTACAGAGTCACAATTGTGTGACCCGAATGGAGTGACGTTGATGGCAACAGACCAAGGATACGGAGACAGAACAGACTTCATAATGAGCCTACGTGCCTTCTCTGGATTGGGACGCGACGAAGCTGCCACGGAACAGTTGAAGAAATACGGAACAGTGGATATTGAATACCAAAGAGTTTCTTGCAACTTGGCTGGCAACATCTTCTTTAGGGTCCAAAAGAGTAGCAGCAACCCAGGATACTTTGCCGGTGTTCCTATCAATGTTGCTGGAAAGTGTGACATCGTTGCCATTGACTTGATGGCCAAGGGCACAGGATGGATGGCGATGCGTAGGAATACTGGAGCAGTATTTGACTTGCAAAACCCACCAAATGGACCATACACTTTGAGGTTCCAATTGAAATGTGATTCTGGAGTTACCTATCTTGAGTCCAAGAACTCTATCCCAACCAATTGGGTCGCTGGAGGAGAATATAACTTGGGAGTTCAGATATAA 735 0.4653 MEIKHKLGLVCMVLLLPAMCSAYFTKSRATFYSTPGGYGTSTGACGYGDYGSSVYNGQVAGVSALWRDGSGCGACYQVKCTESQLCDPNGVTLMATDQGYGDRTDFIMSLRAFSGLGRDEAATEQLKKYGTVDIEYQRVSCNLAGNIFFRVQKSSSNPGYFAGVPINVAGKCDIVAIDLMAKGTGWMAMRRNTGAVFDLQNPPNGPYTLRFQLKCDSGVTYLESKNSIPTNWVAGGEYNLGVQI* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0390 244 Pfam Expansin C-terminal domain 147 229 IPR007117 -
Aev01g0390 244 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 146 IPR007112 -
Aev01g0390 244 Gene3D - 16 142 IPR036908 -
Aev01g0390 244 SUPERFAMILY PHL pollen allergen 146 238 IPR036749 -
Aev01g0390 244 PRINTS Expansin/Lol pI family signature 226 240 IPR007118 GO:0005576
Aev01g0390 244 PRINTS Expansin/Lol pI family signature 23 38 IPR007118 GO:0005576
Aev01g0390 244 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Aev01g0390 244 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
Aev01g0390 244 PRINTS Expansin/Lol pI family signature 129 145 IPR007118 GO:0005576
Aev01g0390 244 PANTHER EXPANSIN-B1-LIKE PROTEIN 3 244 - -
Aev01g0390 244 Gene3D - 143 244 IPR036749 -
Aev01g0390 244 Pfam Lytic transglycolase 59 134 IPR009009 -
Aev01g0390 244 SUPERFAMILY Barwin-like endoglucanases 11 146 IPR036908 -
Aev01g0390 244 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 240 IPR007117 -
Aev01g0390 244 PANTHER EXPANSIN-B3 3 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0390 Aev-Chr1 3302881 3304918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0390 1 244 Expansin Gene Family AT4G17030 42.400 1.55e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0390 - - gmx:100777265 274.633