Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0388 ATGGAGTTTAAGCACCAACTTGGTGTTGTTTGCATGATTCTGTTATTACCTGCACTGTGCAGCGCCACGTCGAACCCATTTACTAAATCCAGAGCAACATTTTATAGCGCCCTTGGTGGCTATGGCACTTCAACGGGAGCTTGTGGCTTTGGGGACTATGGAAGAACGGTTGGTGGTGGTAACGCTGCAGCCGTGTCTGGTCTATGGAGAGGTGGAAGTGGTTGTGGTGCATGCTATTGGGTAAGGTGCACAAATACAGCATTATGTAGTTCCCTTGGAGCAACAGTGGTGGCCACTGACTATGGGCAAGGAGACAGAACAGACTTCATAATGAGCCTTCGCGCCTTCTCAAAATTGGGAAGCAACCCATTCACAACAGAACAATTGAAGAAACAGGGCACAGTGGATGTTGAATACCAAAGGGTGCCTTGCAACTACCTTGGCACTATCAAGTTTAAGGTCGACAAAAACAGCAACAACCCTGGCTACTTTGCTGGTGTTCCTATCAATGTTTCTGGCCAATGCGACATTGTTGCTATTGAGTTCTGGCAACAGGGGAAGGGATGGGTACCCTTGCGCAGGTCATATGGAGCAGTATTTGATTTGCAAAACCCACCAAGTGGCCAAATTGTGTTAAGGTTCAAATTGAATTGTGGTGGTGTCATTAGGTATCTGGTGGCCAAGAACCCTATCCCTGCTACTTGGAAAGCTGGACTAGAATATGACACTGGTGTTCAGGTTTAA 744 0.4704 MEFKHQLGVVCMILLLPALCSATSNPFTKSRATFYSALGGYGTSTGACGFGDYGRTVGGGNAAAVSGLWRGGSGCGACYWVRCTNTALCSSLGATVVATDYGQGDRTDFIMSLRAFSKLGSNPFTTEQLKKQGTVDVEYQRVPCNYLGTIKFKVDKNSNNPGYFAGVPINVSGQCDIVAIEFWQQGKGWVPLRRSYGAVFDLQNPPSGQIVLRFKLNCGGVIRYLVAKNPIPATWKAGLEYDTGVQV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0388 247 PANTHER EXPANSIN-B3 3 247 - -
Aev01g0388 247 Gene3D - 17 145 IPR036908 -
Aev01g0388 247 Pfam Expansin C-terminal domain 150 232 IPR007117 -
Aev01g0388 247 PANTHER EXPANSIN-B1-LIKE PROTEIN 3 247 - -
Aev01g0388 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 162 243 IPR007117 -
Aev01g0388 247 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Aev01g0388 247 Gene3D - 148 247 IPR036749 -
Aev01g0388 247 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Aev01g0388 247 PRINTS Expansin/Lol pI family signature 189 203 IPR007118 GO:0005576
Aev01g0388 247 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Aev01g0388 247 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Aev01g0388 247 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Aev01g0388 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Aev01g0388 247 Pfam Lytic transglycolase 64 139 IPR009009 -
Aev01g0388 247 SUPERFAMILY PHL pollen allergen 149 242 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0388 Aev-Chr1 3281891 3284687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0388 1 245 Expansin Gene Family AT4G17030 44.400 1.76e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0388 - - gmx:100778424 298.901