Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0387 ATGGAAGTTAAGCACGAACTTGGTCTTGTTTGCATTATATTGTTGTTACCTTCACTGTGTAGCGCTTATACGAATTCCAGAGCAACCTTTTATACCACTTCTGATGGCTATGGGACTCCAACGGGAGCTTGTGGGTTTGGCGAATATGGAAGGAAGGTCTATGATGGCAAGGTTGCAGATGTGTCTGGGCTATGGAGGGGTGGAAGTGGTTGCGGTGCATGTTATCATGTATGGTGCACAGATTCAAAATTATGCTATCCGAATGGAGTGATATTGGTGGCAACAAACCAGGGTTATGGAGACAGAACAGATTTTATCATGAGCCCGCGCGCTTTCGCAGGTTTGGCACGCGATGAAGGTGCGATTATTAAATTGAAGGAACAGGGTACAGTGGATGTTGCATACGAAAGGGTGGCTTGCAAATTCCCTGGCACCATAAAGTTTAAGGTCCAAGAAAGCAGCAGTAACCCTGGCTATTTTGCTGGTGTGCCCCTCTATGTTGCTGGAGATTGCGACATCCTTGCTGTTGAGTTGTGGCAACAGGGGAAGGGATGGGTGCCCCTAAACAGGTCCTACGGAGCAGTATTTGACTTGCCAAACCCACCAAGTGGTCAAATTCTGTTGAGGTTCAAATTGGATTGTGGTGGTTTCATCAAGTATGTGAAGGCTGCGAAGCCAATACCTGGAAATTGGAAACCAGGAGTAGAATATGATACTGGGGTTCAGTTTTAG 732 0.4645 MEVKHELGLVCIILLLPSLCSAYTNSRATFYTTSDGYGTPTGACGFGEYGRKVYDGKVADVSGLWRGGSGCGACYHVWCTDSKLCYPNGVILVATNQGYGDRTDFIMSPRAFAGLARDEGAIIKLKEQGTVDVAYERVACKFPGTIKFKVQESSSNPGYFAGVPLYVAGDCDILAVELWQQGKGWVPLNRSYGAVFDLPNPPSGQILLRFKLDCGGFIKYVKAAKPIPGNWKPGVEYDTGVQF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0387 243 Gene3D - 144 243 IPR036749 -
Aev01g0387 243 Pfam Lytic transglycolase 64 135 IPR009009 -
Aev01g0387 243 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 145 IPR007112 -
Aev01g0387 243 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Aev01g0387 243 PRINTS Expansin/Lol pI family signature 22 37 IPR007118 GO:0005576
Aev01g0387 243 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Aev01g0387 243 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Aev01g0387 243 PRINTS Expansin/Lol pI family signature 128 144 IPR007118 GO:0005576
Aev01g0387 243 PANTHER EXPANSIN-B1-LIKE PROTEIN 3 242 - -
Aev01g0387 243 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 239 IPR007117 -
Aev01g0387 243 SUPERFAMILY Barwin-like endoglucanases 11 144 IPR036908 -
Aev01g0387 243 SUPERFAMILY PHL pollen allergen 145 238 IPR036749 -
Aev01g0387 243 Pfam Expansin C-terminal domain 146 221 IPR007117 -
Aev01g0387 243 Gene3D - 18 141 IPR036908 -
Aev01g0387 243 PANTHER EXPANSIN-B3 3 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0387 Aev-Chr1 3276285 3278770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0387 1 241 Expansin Gene Family AT4G17030 43.952 5.22e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0387 - - gmx:100778963 293.508