Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0385 ATGGGCAAGCAAGGTCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAACGGCCCCCCTGAGAAGCCAGTTCTATGCAATGCATGTGGATCTCGCTGGAGAACAAAAGGAACACTAGCAAATTATACCCCTTTACATGCTCGAGCAGAAACTGATGATTCTGAAGATCAAAAGGCTTCCAGGGTAAAGAACATATCATTAAACAAAAATAAAGAAGTGAAGTTGCTCAAACGAAAGCAGAACCATGATTATGCTGCACCTGGAGGGCTTGGCCCTGATTACAATCAAGGATTCCGAAAGGTTCTGGATGAAGATACAAGCAACAGATCAAGTTCAGGGTCAGCTGGCTCTAACTTAGAGAGCTGCGGTCATTTTGGTGGCACGGATGCTAGTGCTCATTTTGGTGGCACGGATGCTAGTGATTTGACAGGTCCTGTTCAGTCAGTGGTCTGGGATGCCACGGTGCCTTCGAAAAAGAGGACATGTGCAGGTCGTCCAAAGGCTTCTTCTGTTGAGAAGCTCACAAAAGATTTATGTACTATACTTCATGAACAACAGTCTTATTTTTCTACGTCTTCGGAAGACGATCTTCTTTTTGAAAGTGAAGCTCCTATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATTAGGCATCCTAGCTCTATAGCTCGCGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAACAAACAACGCCTAATGAATGAGGCATATTCATATTCGGGTGCCATTCCTATGCATAGTGACTGCAGCGGAGTGAACTCGTCACAGGGAGTTGAAAAGGTCAGAAACTCTGCCGGAAACGTAATTCAACAGGAGCAACTTCAAAGGGACAAGTCGCAGCTTGAAAGATTACAAGTCCTTGGAAATCATAATTCACCACTATGCTTAATAGATTTGAATGATGTAGTGAACTATGAGGAGTTTACAAGAAACTTGACAAGTGAAGAGCAGCACCAGTTATTGAAGTATCTTCCTGTGGTTGATACTGCTAAACCTCCTGATAGCCTTAAAACCATGTTCAACAGCTCTCAATTCAAGGAGAACTTATATTATTTTCAGCAACTTCTCGGGGAAGGTGTCTTTGATATCTCTATGTCGGGAGCAAAACCAGAAGACTGCAAGACATTGAAGAGGCTTGCATTATCTAATCTGTCAAAGTCAAAATGGGTAGAGCACTATAGTTTTCTCAAGAAATGTAAAAACAAAGCTGGAAAATCAATTGCTCTGGAATCTGCTTGTATGGCATCAAGTAATGTAACAAAAGTCAAGAGATTGCATGAAAGCCAAATTCAAAATTTCCAAGATTTGAAGACAACAATGAGAAGTCCCAAAAGGGTGATCATCAAGTCTGGCAGCGAGGGCAAAGAAACCGTGGATGATGGGTGTTGCTTCAGTCCGAGAAACCTATTTGCCTTGCCTCGTGACGGTAGCTCGCTCGTGCTGGATTCCTTAAACTTCGTGGACGAGAACTCCGATCAGGATCTGCTGCTAGAGGTTCCATCTAACAGCTTTTTCCCGCAAGCCGAACTCCTGAACCCAACTCTAAGCTATGGTGCTCAAGCCAGCACTAGTACTACTAGCTCAGTTAAATCACATATTACCCATCCTTAA 1650 0.4345 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDDSEDQKASRVKNISLNKNKEVKLLKRKQNHDYAAPGGLGPDYNQGFRKVLDEDTSNRSSSGSAGSNLESCGHFGGTDASAHFGGTDASDLTGPVQSVVWDATVPSKKRTCAGRPKASSVEKLTKDLCTILHEQQSYFSTSSEDDLLFESEAPMVSVEIGHGSILIRHPSSIAREEESEASSLSVDNKQRLMNEAYSYSGAIPMHSDCSGVNSSQGVEKVRNSAGNVIQQEQLQRDKSQLERLQVLGNHNSPLCLIDLNDVVNYEEFTRNLTSEEQHQLLKYLPVVDTAKPPDSLKTMFNSSQFKENLYYFQQLLGEGVFDISMSGAKPEDCKTLKRLALSNLSKSKWVEHYSFLKKCKNKAGKSIALESACMASSNVTKVKRLHESQIQNFQDLKTTMRSPKRVIIKSGSEGKETVDDGCCFSPRNLFALPRDGSSLVLDSLNFVDENSDQDLLLEVPSNSFFPQAELLNPTLSYGAQASTSTTSSVKSHITHP* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0385 549 PANTHER OSJNBB0038F03.10 PROTEIN 1 549 IPR044589 -
Aev01g0385 549 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Aev01g0385 549 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Aev01g0385 549 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Aev01g0385 549 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Aev01g0385 549 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Aev01g0385 549 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Aev01g0385 549 Pfam Asx homology domain 291 375 IPR028020 -
Aev01g0385 549 Gene3D - 291 396 IPR038108 -
Aev01g0385 549 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
Aev01g0385 549 PANTHER GATA TRANSCRIPTION FACTOR-LIKE PROTEIN 1 549 - -
Aev01g0385 549 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 303 415 IPR044867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0385 Aev-Chr1 3265473 3270568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0385 1 525 C2C2-Gata Transcription Factor Family AT4G17570 52.514 5.30e-158 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev01g0385 ASXH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0385 - - gmx:100799745 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0836 05 5857566 5862259 Aev01g0385 01 3265473 3270568 PCT