Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0373 ATGGCGAACCAAGCTGAAATTTCAGCCTTGAACCGCATCAAATTGCATCTCTTAGGTGAACTCTCACCGTTGGGTACACCAGAATTCACACAACACAAACTCTGCTTCGAAATCGACGAATCCAAAAACCCTAACAAATCCCAATCTGAATCTCAATCTTCATCTTCTGAATCCTCATCAATTTCTTTTAACCACTACTTCACCGATTTCATGGATAAGGAAACCCAGCTTCCTCTGTTCGAATTTGATTCCAAGCCTCAAGAGATCAACCAAACCCTAATTCAACAACAAAATCCCCAAATCGAAAACAAGCCTCGCTTGAATCGGAAACCTTCGCTGCAAATCTCGCTCCCGAAGAAGCAAACCGAGTGGATCCAGTTTGGAAACCCGGTTCAACCCGAACCGGCTCAAGTTTCGGAACCGCAACAGCAGCCAGCGGAGGAGGTGGCGGCACCGGCGCCGGAGAAGAAGCACTATAGAGGTGTGCGTCAGAGACCGTGGGGGAAGTTCGCCGCCGAGATCCGCGACCCGAACAAGCGCGGCTCGAGAGTGTGGCTCGGAACGTTCGACACCGCCATCGAAGCCGCCAAGGCTTACGACCGCGCCGCCTTCAGACTCAGAGGATCCAAGGCCATCCTCAACTTCCCACTGGAAGTCGATGCTATGGCCTCCGCCTCCGCCGCCACCACAACCTCTGTCGCCTCCGGCGGCGACGGAGAGAGGAAGCGCCGCCGCGAAGAGGTAGAGGCAGCTGAGGAGGAGGTAATTGAAGTGAAGGCGGTGAAGAAAGAGAAGAAGGTGGAAACGGATAATAACGGTGTTAAGGAAGCTCCGTTAACGCCGTCAGTTTGGACTGGGTTCTGGGACAATGATGTGAAAGGGATCTTTAACGTTCCGCCGTTGTCGCCGTTATCTCCTCTTCCACCTTTTGGTTTCCCACAGCTTATGGTTGTCTAA 957 0.5246 MANQAEISALNRIKLHLLGELSPLGTPEFTQHKLCFEIDESKNPNKSQSESQSSSSESSSISFNHYFTDFMDKETQLPLFEFDSKPQEINQTLIQQQNPQIENKPRLNRKPSLQISLPKKQTEWIQFGNPVQPEPAQVSEPQQQPAEEVAAPAPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEVDAMASASAATTTSVASGGDGERKRRREEVEAAEEEVIEVKAVKKEKKVETDNNGVKEAPLTPSVWTGFWDNDVKGIFNVPPLSPLSPLPPFGFPQLMVV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0373 318 Pfam AP2 domain 158 208 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 PRINTS Ethylene responsive element binding protein signature 159 170 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 PRINTS Ethylene responsive element binding protein signature 198 218 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 Coils Coil 241 268 - -
Aev01g0373 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 3 303 - -
Aev01g0373 318 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 303 - -
Aev01g0373 318 MobiDBLite consensus disorder prediction 133 162 - -
Aev01g0373 318 MobiDBLite consensus disorder prediction 45 60 - -
Aev01g0373 318 ProSiteProfiles AP2/ERF domain profile. 158 216 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 CDD AP2 157 216 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 Gene3D AP2/ERF domain 157 218 IPR036955 GO:0003700|GO:0006355
Aev01g0373 318 MobiDBLite consensus disorder prediction 227 247 - -
Aev01g0373 318 SUPERFAMILY DNA-binding domain 158 218 IPR016177 GO:0003677
Aev01g0373 318 SMART rav1_2 158 222 IPR001471 GO:0003700|GO:0006355
Aev01g0373 318 MobiDBLite consensus disorder prediction 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0373 Aev-Chr1 3159338 3160294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0373 1 318 AP2-EREBP Transcription Factor Family AT5G47230 44.315 3.78e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g0373 AP2 7.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0373 K09286 - gmx:100800453 294.664