LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g0369	ATGTTAATAGAGGAATTGAAGGGTGGTGAGGTTGAGTTGGGAGAAAGTGGAGAGGAAGAGAGGTCGTCAAGCTTTGTGGGCTATGATGCGAAAAGGGTTCTGGTAGGAGCAGGGGCTCGTGCTCTCTTCTATCCCACACTGTTTTACAATGTCGTTAGGAATAAGATTCAGGCTGAATTTCGATGGTGGGATAGGGTCGATGAGTTCATACTATTAGGTGCTGTTCCATTCCCTATTGATGTTCCCCGCTTGAAGGAGCTTGGTGTACGTGGGGTTGTCACATTGAATGAATCATATGAGACTTTGGTTCCAACCACATTATATTATGCTCATGGAATTGACCATCTGGTGATTCCCACTAGAGATTACTGTTTTGCTCCAAAATTGCATGACATATGCCGTGCTGTGGACTTCATACATGAAAATGCATTGTCTGGACGCACTACATATGTCCACTGCAAAGCTGGCCGTGGTCGCAGTACAACTATTGTCATTTGTTATCTGGTTCACCACAAACTAATGACACCTGATGCTGCATATGATTATTTGAAGTCAATTCGCCCAAGGGTGCTTCTAGCTTCATCTCAGTGGCAAGCAGTCCAGGAGTACTACTGCTACCTGATGATGAAGAGGGCTGTTGGACGTACACCTATGGCAGATGTATTAGCAAAGGCTTCCGAGGTTGCAATTGCCTCGCGAGATCTTATAAAGTTCGACGACAACTCTGTCGTCGTGGTAACAGAGTCAGATCTTGAAGGATACGACCCAAGCCAGTCGGAAACAATGCCAAGTGAAATATGGGCAGATGTGAGCGTGGTATATCGCGTACGAGTTGCCGGACAGGCAGCATTGGCAAGAATCTCGTGCCTCTGGCTGCGGTACGGTACGAACGAGAAGGTTTCTGCTGAGAAACTGAGCAGTGATAGCAGTTGCTCAATCCAGACTAATAACTTGCGAGGAATTAGTATTGATATCCATGTGTACTGA	987	0.461	MLIEELKGGEVELGESGEEERSSSFVGYDAKRVLVGAGARALFYPTLFYNVVRNKIQAEFRWWDRVDEFILLGAVPFPIDVPRLKELGVRGVVTLNESYETLVPTTLYYAHGIDHLVIPTRDYCFAPKLHDICRAVDFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKLMTPDAAYDYLKSIRPRVLLASSQWQAVQEYYCYLMMKRAVGRTPMADVLAKASEVAIASRDLIKFDDNSVVVVTESDLEGYDPSQSETMPSEIWADVSVVYRVRVAGQAALARISCLWLRYGTNEKVSAEKLSSDSSCSIQTNNLRGISIDIHVY*	329

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g0369	328	Pfam	Dual specificity phosphatase, catalytic domain	106	204	IPR000340	GO:0008138\|GO:0016311
	Aev01g0369	328	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	130	198	IPR000387	GO:0016311\|GO:0016791
	Aev01g0369	328	SMART	ptp_7	104	215	IPR003595	-
	Aev01g0369	328	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	54	209	IPR029021	-
	Aev01g0369	328	SMART	dsp_5	65	206	IPR020422	GO:0006470\|GO:0008138
	Aev01g0369	328	PANTHER	-	1	328	-	-
	Aev01g0369	328	ProSitePatterns	Tyrosine specific protein phosphatases active site.	151	161	IPR016130	GO:0016311\|GO:0016791
	Aev01g0369	328	PANTHER	DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED	1	328	-	-
	Aev01g0369	328	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	62	209	IPR020422	GO:0006470\|GO:0008138
	Aev01g0369	328	Gene3D	Protein tyrosine phosphatase superfamily	62	214	IPR029021	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g0369	Aev-Chr1	3121194	3124580	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g0369	12	328	Protein tyrosine phosphatase (PTP) family	AT2G35680	56.395	1.69e-129	371

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g0369	-		-	adu:107485250	536.954

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