Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0365 ATGACCCGGCGATGCTCGCATTGCAGCCACAATGGGCACAACTCTCGGACATGTCCGAACCGCGGCGTGAAGCTATTCGGTGTCCGGTTGACCGATGGGTCGATCCGGAAGAGTGCAAGTATGGGTAATCTGAGTCACTATGCTGGTTCCGGGTCGGGTCCGATTCATGCTTCCGGGTCGAATAACCCGGGTTCGCCTGGTGAGACACCTGATCATGCTGCTGCTGCTGCTGATGGTTATGCCTCTGAGGATTTCGTTCCTGGGTCTTCTTCTAGCTCCCGTGAAAGAAAGAAGGGCGTTCCGTGGACTGAGGAGGAACATAGAATGTTTTTACTCGGACTGCAGAAGTTGGGCAAAGGTGACTGGCGTGGAATCGCAAGGAACTATGTTATATCAAGGACACCAACTCAAGTGGCCAGTCATGCTCAAAAGTATTTCATTAGGCAAAGCAATGTGTCTAGACGGAAAAGGCGCTCCAGCTTGTTTGATATTGTTGCAGATGATGCGGCCGACACTCCGATGATACAGCAAGACTTCTTGTCACCTAATCAGGTCCAAACTGAAACAGAAGGCAATAACCCCTTGCCTGCTGCTCCGGCCCTCGATGAAGAGTGCGAATCCATGGATTCCACCAACTCCAATGACGGAGGAGACTCTGCCCCATTAAAGCCCGAAACCACCACACAACCATCGTATCCGGTGCTATATCCTGCATACTATTCTCCTATCTTCCCATTTCCTCTGCCATATTGGTCAGGATACAGTCCAGAACCCACAAAGAAGGAGGAGACACATGAAGTTCTGAAGCCAACCGCAGTACATTCTAAGACCCCAATCAATGTCGACGAACTCGTCGGCATGTCAAAACTCAGCTTAGGAGACTCCATTGGCGACTCGGGCCCGTCCTCTCTGTCTCTTAAACTCACCGAAGAAGGTCCCTCCAGACAGTCAGCGTTTCACGCAACACCGACGACATGTGGCAGCTCGAATATGAGCGGCAGTGCTATCCATGCACTTTAA 1020 0.5137 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYAGSGSGPIHASGSNNPGSPGETPDHAAAAADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADDAADTPMIQQDFLSPNQVQTETEGNNPLPAAPALDEECESMDSTNSNDGGDSAPLKPETTTQPSYPVLYPAYYSPIFPFPLPYWSGYSPEPTKKEETHEVLKPTAVHSKTPINVDELVGMSKLSLGDSIGDSGPSSLSLKLTEEGPSRQSAFHATPTTCGSSNMSGSAIHAL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0365 339 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Aev01g0365 339 SMART sant 98 148 IPR001005 -
Aev01g0365 339 ProSiteProfiles SANT domain profile. 102 150 IPR017884 -
Aev01g0365 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 150 IPR017930 -
Aev01g0365 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Aev01g0365 339 PANTHER BNAC01G21010D PROTEIN 1 330 - -
Aev01g0365 339 MobiDBLite consensus disorder prediction 184 228 - -
Aev01g0365 339 Gene3D - 100 152 - -
Aev01g0365 339 PANTHER TRANSCRIPTION FACTOR KUA1 1 330 - -
Aev01g0365 339 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Aev01g0365 339 MobiDBLite consensus disorder prediction 1 21 - -
Aev01g0365 339 ProSiteProfiles Myb-like domain profile. 94 146 IPR001005 -
Aev01g0365 339 MobiDBLite consensus disorder prediction 296 339 - -
Aev01g0365 339 MobiDBLite consensus disorder prediction 45 103 - -
Aev01g0365 339 CDD SANT 101 146 IPR001005 -
Aev01g0365 339 MobiDBLite consensus disorder prediction 206 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0365 Aev-Chr1 3082471 3086193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev01g0365 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0365 - - ccaj:109807943 613.994