Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0361 ATGGCTCCTAAATCCATGAAGTATGATGGACCAACTAAGAAAGAAGTGATGAACAAAGGAGCATGGACCCCAGAAGAAGATAGGAAGCTAGCTCATTGTATTGAAGTTCATGGTGCAAAGAGGTGGAAGACTATTTCAGTCAAATCAGGTCTAAATAGATGTGGAAAGAGTTGCAGGTTGAGATGGCTAAACTATCTAAGACCCAATATCAAGAGGGGAAACATATCAAATGAAGAAGAAGATCTGATTATTAGGCTTCATAAACTTCTAGGGAATAGGTGGTCTCTGATAGCTGGAAGGATTCCAGGAAGAACAGACAACGAAATAAAGAACTATTGGAATTCTCATTTGTGCAAAAAAATTAATCACAAAGAGGAAAAACTAGAAACTTCAACTGCACAAGAAAGTGTCACACAGGACCATAACACTGGTGAGAGTGCAGTGTTAGAACATGATGATGATGATGTTGGTGAAAGCTCAGATAATGTCAACTTTGATGTGAACGAATTCTTCGATTTCTCGACAGATCATGAAAATTTCGGGTTCGATTGGATGAACAAGTACTTAGAACTTGATGATCAGATTCAGAACACAAAAGAAGAAATAAATCTGCATTTCAGAACACAAAAGAAGAAATAA 639 0.3725 MAPKSMKYDGPTKKEVMNKGAWTPEEDRKLAHCIEVHGAKRWKTISVKSGLNRCGKSCRLRWLNYLRPNIKRGNISNEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEIKNYWNSHLCKKINHKEEKLETSTAQESVTQDHNTGESAVLEHDDDDVGESSDNVNFDVNEFFDFSTDHENFGFDWMNKYLELDDQIQNTKEEINLHFRTQKKK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0361 212 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 198 - -
Aev01g0361 212 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Aev01g0361 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Aev01g0361 212 CDD SANT 76 117 IPR001005 -
Aev01g0361 212 Gene3D - 75 146 - -
Aev01g0361 212 SMART sant 18 68 IPR001005 -
Aev01g0361 212 SMART sant 71 119 IPR001005 -
Aev01g0361 212 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 9 198 - -
Aev01g0361 212 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Aev01g0361 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Aev01g0361 212 Gene3D - 19 71 - -
Aev01g0361 212 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Aev01g0361 212 CDD SANT 21 66 IPR001005 -
Aev01g0361 212 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Aev01g0361 212 Pfam Myb-like DNA-binding domain 72 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0361 Aev-Chr1 3035829 3038172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0361 3 197 MYB Transcription Factor Family AT3G13540 43.902 5.35e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g0361 Myb_DNA-binding 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0361 K09422 - gmx:100799575 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0860 05 6027078 6034838 Aev01g0361 01 3035829 3038172 PCT