Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0357 ATGATAGGTGCGTACAAGTATGTTTCGGAGCTATGGCGAAAGAAACAATCGGATGTGATGAGGTTTCTCCAGCGCGTGAGGTGCTGGGAGTATCGTCAACAACCTTCCATTGTTCGCCTTACTAGGCCTACTCGCCCTGACAAGGCTCGTCGCTTGGGTTACAAGGCCAAGCAGGGCTATGTGGTTTACCGTGTTCGTGTGAGAAGGGGTGGTCGCAAGAGACCAGTACCTAAGGGTATTGTGTATGGGAAGCCCACAAACCAGGGTGTTACCCAACTCAAGTTTCAGCGAAGCAAGAGATCAGTTGCTGAGGAGCGAGCTGGACGTAAGCTTGGTGGCCTCAGGGTCCTCAACTCTTACTGGGTGAATGAGGACTCGACTTACAAATATTACGAGATCATTCTTGTTGATGTTGCACACAGTGCCATCAGAAACGATCCAAGGATCAATTGGCTCTGCAACCCAGTCCACAAGCACAGGGAGTTGCGAGGCCTCACTTCTGCCGGGAAAAGCAACAGGGGTCTGCGTGGCAGAGGACATCTGTACCACAAAAATCGCCCTTCCCGCAGGGCAACCTGGAAGAGAAACAACTCCCTCTCCCTTCTTCGTTACCGTTGA 618 0.5178 MIGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHSAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKNRPSRRATWKRNNSLSLLRYR* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0357 205 ProSitePatterns Ribosomal protein L15e signature. 47 70 IPR020925 GO:0003735|GO:0005840|GO:0006412
Aev01g0357 205 PANTHER RIBOSOMAL PROTEIN L15 2 205 - -
Aev01g0357 205 PANTHER RIBOSOMAL PROTEIN L15 2 205 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aev01g0357 205 MobiDBLite consensus disorder prediction 165 189 - -
Aev01g0357 205 Gene3D Ribosomal protein l15e 2 205 IPR024794 GO:0003735|GO:0005840
Aev01g0357 205 Pfam Ribosomal L15 3 191 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aev01g0357 205 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 2 196 IPR012678 GO:0003735|GO:0005840|GO:0006412
Aev01g0357 205 SMART Ribosomal_L15e_2 3 194 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0357 Aev-Chr1 3012163 3013531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0357 2 205 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.157 1.99e-127 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0357 K02877 - gmx:100306052 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0861 05 6035864 6038345 Aev01g0357 01 3012163 3013531 PCT