Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0302 ATGTCATCATCATCATCATCATCTTCAACCATCACTACATTATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGCTATGTTCACTGCAACATTTGTGACACAGTCCTTGCTGTGAGTGTTCCTTGCACAAGCTTGTTCAAGACGGTGACAGTGAGATGTGGGCATTGCACAAACCTGCTGCCAGTGAACATGAGAGGATTGCTTCTTCCTTCGCCAAATCAATTCCATTTGCCTCACTCTTTCTTCTCTCCACCACCTCCTCATCCTCATAACCTTCTCGAGGAGATCCCAAACCCAGCCCCAAATTTCTTTATGAACCAAGTAAACACAACAAATGATCACTTCTCCATGCCTCCTGCTAGGACTCCAATTGATGAGCTTCCAAGGCCACCAATCATTAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCTTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGTGAATCCCGATATAACCCACAGAGAAGCCTTCAGCGCTGCTGCCAAGAATTGGGCCCACTTTCCACACATCCACTTTGGTCTCATGCCTGATCATCAGACTGTGAAGAAAACAAATGTGCGCCAGCAGGAAGGAGAAGAGGTTCTGATGAAAGATGCAGGGTTTTATGCTGCTTCGGCTAATGTTGGTGTTTCACCCTACTAG 687 0.4716 MSSSSSSSSTITTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHLPHSFFSPPPPHPHNLLEEIPNPAPNFFMNQVNTTNDHFSMPPARTPIDELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDHQTVKKTNVRQQEGEEVLMKDAGFYAASANVGVSPY* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0302 228 PANTHER PROTEIN YABBY 6-RELATED 1 226 IPR006780 GO:0007275
Aev01g0302 228 Pfam YABBY protein 21 189 IPR006780 GO:0007275
Aev01g0302 228 Gene3D High mobility group box domain 134 205 IPR036910 -
Aev01g0302 228 PANTHER AXIAL REGULATOR YABBY 3 1 226 - -
Aev01g0302 228 MobiDBLite consensus disorder prediction 122 143 - -
Aev01g0302 228 SUPERFAMILY HMG-box 133 183 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0302 Aev-Chr1 2499401 2503726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0302 32 226 C2C2-YABBY Transcription Factor Family AT4G00180 61.244 1.16e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev01g0302 YABBY 4.7e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0302 K25796 - gmx:100798441 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0302 01 2499401 2503726 Aev01g0302 01 2499401 2503726 ECH