Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0299 ATGGCCGAAGAAGCCAAGGCCAAAGGCAACGCCGCCTTCTCCGCCGGCGACTTCACCGCCGCCGCCAGACACTTCTCCGACGCCATCGCAATTTCTCCTGACAACCACGTCCTCTATTCTAACCGATCCGCCGCCTACGCCTCCCTGCACGACTACTCCCAAGCCCTCTCCGACGCCGTCAAAACCGTTGAACTCAAGCCTGACTGGCCAAAAGGCTACAGCCGCCTCGGCGCCGCGCACCTCGGCCTTGGCCACCATGACGACGCCGTTTCCGCCTACAAAAAAGGCCTCGAAGTCGATCCCAACAACGAAGCCCTAAAATCCGGCCTCGCCGACGCCAAGGCGGCGGCGGCTGCGTCGGCGTCGAGGTCTCGTCCTCCGCCGGGAAATCCGTTCGGTGATGTGTTCTCCGGGCCGGAGATGTGGACTAGGCTCACCGCCGACCCGTCCACCCGGGCTTTTCTTCAGCAACCTGATTTCGTGAAGATGATGCAGGAAATTCAGAAGGATCCGAATAATTTGAACTTGTATTTGAAGGATCAGAGGGTTATGCAAGCCCTAGGGGTTTTGCTCAACGTGAAGATTCAGACTCGCGATGACTTTGGCGGAGACGAGAGTATGCCAGAGGCTTCTGCAGAGCCAACACCACCACCGCCTCAGCCGACGGAGAGGAAGCGAGCTGCGGAGGAGGAGGCGTCTCGGCCGGCAGCGGCGGAGGAGGAAAAGGAGGCTGTGGAGTTGAATGATGATGAGAAGGGGGCGAAGGAGAGGAAGGGTTTGGCCCAGAAGGAGAAGGAAGCAGGGAATGCGGCTTATAAGAAGAAGGATTTTGACACTGCAATTCAGCATTACACAAAGGCTTTGGAATTGGATGATGAGGATATATCGTTCCTCACGAATCGTGCCGCAGTTTACTTGGAGATGGGAAAGTATGATGAATGCATAAAAGATTGTGACAAGGCTGTTGAAAGAGGAAGAGAACTGAGGTCAGATTTCAAGATGATAGCAAGAGCTTTGACAAGGAAAGGAACTGCATTGGTCAAAATGGCAAAATGCTCAAAGGATTATGATCCTGCCATCGAGACTTTCCAAAAGGCACTTACAGAGCACCGCAACCCAGACACGTTGAAGAAACTGAATGAAGCTGAAAAGGCTAAGAAAGAGCTAGAACAAGAAGAATATTTTGATCCACAATTGGCTGATGAGGAAAGAGAAAAGGGAAATGAATTCTTCAAGGTGCAAAAGTATCCTGAGGCTGTGAAACATTATACAGAAGCTGTAAAAAGAAACCCTAAAGATCACAAGGCTTACAGTAACAGAGCTGCATGCTACACAAAACTCGGGGCATTGCCGGAAGGTTTAAAGGATGCGGAGAAGTGCATTGAGCTGGATCCAACCTTTTCGAAGGGTTATACTAGGAAAGGTGCAGTACAGTTTTTCATGAAAGAATATGACAAAGCCATGGAAACGTATAAGGAGGGTCTGAAACATGACCCTAACAACCAGGAGTTTCTTGATGGTATTAGAAGATGTGTAGAACAAATCAATAAGGCTAGTAGGGGAGATTTAAGTCCTGAGGAATTGAAGGAGAGACAGGCCAAGGCAATGCAGGATCCTGAAATCCAGAACATCCTACAAGACCCTGTTATGAGACAAGTTTTGGTTGATTTCCAGGAAAATCCCAAGGCTGCACAGGAACATACGAAGAATCCAATGGTGATGAACAAGATCCAAAAGCTGATAAGTGCTGGAATTGTTCAGATGAAGTGA 1770 0.4989 MAEEAKAKGNAAFSAGDFTAAARHFSDAIAISPDNHVLYSNRSAAYASLHDYSQALSDAVKTVELKPDWPKGYSRLGAAHLGLGHHDDAVSAYKKGLEVDPNNEALKSGLADAKAAAAASASRSRPPPGNPFGDVFSGPEMWTRLTADPSTRAFLQQPDFVKMMQEIQKDPNNLNLYLKDQRVMQALGVLLNVKIQTRDDFGGDESMPEASAEPTPPPPQPTERKRAAEEEASRPAAAEEEKEAVELNDDEKGAKERKGLAQKEKEAGNAAYKKKDFDTAIQHYTKALELDDEDISFLTNRAAVYLEMGKYDECIKDCDKAVERGRELRSDFKMIARALTRKGTALVKMAKCSKDYDPAIETFQKALTEHRNPDTLKKLNEAEKAKKELEQEEYFDPQLADEEREKGNEFFKVQKYPEAVKHYTEAVKRNPKDHKAYSNRAACYTKLGALPEGLKDAEKCIELDPTFSKGYTRKGAVQFFMKEYDKAMETYKEGLKHDPNNQEFLDGIRRCVEQINKASRGDLSPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLISAGIVQMK* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0299 589 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Aev01g0299 589 Gene3D Tetratricopeptide repeat domain 398 513 IPR011990 GO:0005515
Aev01g0299 589 SMART tpr_5 468 501 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 261 294 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 70 103 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 336 373 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 295 328 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 2 35 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 434 467 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 36 69 IPR019734 GO:0005515
Aev01g0299 589 SMART tpr_5 400 433 IPR019734 GO:0005515
Aev01g0299 589 SMART CBM 538 577 IPR006636 -
Aev01g0299 589 SMART CBM 138 177 IPR006636 -
Aev01g0299 589 SUPERFAMILY TPR-like 8 508 IPR011990 GO:0005515
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 400 433 IPR019734 GO:0005515
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 261 294 IPR019734 GO:0005515
Aev01g0299 589 SUPERFAMILY TPR-like 260 388 IPR011990 GO:0005515
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Aev01g0299 589 Pfam Tetratricopeptide repeat 406 457 - -
Aev01g0299 589 Pfam Tetratricopeptide repeat 7 62 - -
Aev01g0299 589 PANTHER TPR REPEAT CONTAINING PROTEIN 1 588 IPR045248 GO:0006457|GO:0030544|GO:0051879
Aev01g0299 589 Pfam TPR repeat 268 309 - -
Aev01g0299 589 Coils Coil 372 392 - -
Aev01g0299 589 Pfam Tetratricopeptide repeat 469 501 IPR001440 GO:0005515
Aev01g0299 589 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Aev01g0299 589 Pfam STI1 domain 530 581 IPR041243 -
Aev01g0299 589 Pfam STI1 domain 139 192 IPR041243 -
Aev01g0299 589 MobiDBLite consensus disorder prediction 200 269 - -
Aev01g0299 589 MobiDBLite consensus disorder prediction 223 269 - -
Aev01g0299 589 Gene3D - 519 589 - -
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 434 467 IPR019734 GO:0005515
Aev01g0299 589 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 1 588 - -
Aev01g0299 589 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Aev01g0299 589 Gene3D - 128 196 - -
Aev01g0299 589 Coils Coil 237 257 - -
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 468 501 IPR019734 GO:0005515
Aev01g0299 589 Gene3D Tetratricopeptide repeat domain 258 394 IPR011990 GO:0005515
Aev01g0299 589 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Aev01g0299 589 MobiDBLite consensus disorder prediction 117 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0299 Aev-Chr1 2443926 2446973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0299 1 99 U-box Gene Family AT3G07370 28.283 1.74e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0299 K09553 - vvi:100855394 905.205