Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0298 ATGAACATCTTCTTTTTCATCACCACAAATCACACAGCAGAATCAGCACTCACAAAACCACCACCCAATAACAACCCAACAACATTAGATTTCATAAAATCCTCATGCAAATCAACACTCTACCCTTCACTCTGCATCCAATCTCTCACAACCTATGCAACCACCATTCGCCGTAGCGAAAAACAACTAGTGCTAACGGCCTTAGCCGTTAGCACATCAACGACCCAATCGTGTGCGTCGTTCGTGCGAAAAATGGCGAAAACAAAAGGGATCAATGCAAGGGAACACAGGGCAGTGCAGGATTGCATTGAGAACATGGATGATAGTGTGGACAGGCTAAGCCAATCGGCGAAGGAGATCGGGCTCACCGGCCGGGCCGTAGGAGAGGATTTTGCTTGGCATATGAGTAATGTTCAGACTTGGGTTAGTGCTGCAATGACGGATCAGAGTACTTGTATTGATGGATTCTCTGGGGAATTTTATCGAACAGATGGAAGGTTGAAAGCTGCTATAAGGGCAAAAGTTGTTAATGCTTCTCAGGTTACTAGTAATGCTCTTGCTTTGGTTAATCGCTTTGCTTCCAAGCATACACTGATTGAAAAGCCAAAGAACAGAGCAAAAAACAGAGCAAAGAAGAAGCAGCAGCAGAAGAAGAAGAAGCACCCCAACAACAATACTATGGCGACAGAATCTTTGAGGGTGGTGACTTCATCACTTTGCAACCTCAATGGGTCTCAGAGGAGACCGACACTTTTCTCTCCGGTTCGATTCATGGGTCTTCGTCCACCACGACCCTCTCACTCTTCTTCTTCTTCTTCTTCTTCACTCTCTAACTTCTTTGGGTCTTCACGAATCAGTGTCAATTCTTCAAAGCTGCACCATTTGCGCCAACAGGGTCGCAGAAACTTTTCTGTTTTCGCCATGTCAGCTGATGAAACTAAGCGTGCTGTTCCGCTGAGGGATTATCGCAACATTGGCATCATGGCTCACATTGATGCTGGGAAGACAACTACAACCGAGAGAATTCTCTACTACACTGGAAGAAACTACAAGATTGGAGAGGTACACGAGGGAACAGCAACGATGGACTGGATGGAACAAGAGCAAGAAAGAGGGATTACCATTACTTCTGCTGCGACCACTACGTTTTGGGATAAGCACCGGATCAACATTATTGATACCCCTGGGCACGTCGACTTCACCTTAGAAGTGGAACGTGCTCTTAGGGTCTTGGATGGAGCTATATGCCTGTTTGACAGTGTTGCCGGTGTAGAACCTCAATCAGAAACCGTGTGGAGGCAAGCTGATAAATATGGGGTCCCACGAATTTGTTTTGTCAACAAAATGGATCGACTCGGAGCAAATTTCTTTCGTACAAGAGACATGATAGTAACAAATTTAGGTGCTAAACCACTTGTAATTCAGTTACCAATTGGTGCAGAAGATACCTTCAAGGGAGTTGTTGATCTTGTTAGGATGAAAGCTATAGTTTGGTCTGGAGAAGAGTTGGGTGCCAAGTTTGATTATGAAGATATTCCTGCAGATCTTCAAGAGCTGGCTCAGGAATACAGAGCACAGATGATAGAAACCATAGTCGAGTTGGATGATCAGGCTATGGAGAACTACCTTGAAGGGGTTGAACCAGATGAAGAAACTATTAAAAAGTTAATTAGGAAGGGAACCATATCGGCCAGTTTTGTCCCGGTGTTGTGTGGCTCAGCTTTCAAAAACAAAGGTGTCCAACCATTGCTTGATGCCGTGGTGGATTATCTACCTTCACCAATTGAGTTGCCTCCAATGAAGGGCACTGATCCTGAAAACCCAGAAGCAACATTAGAGAGGGCAGCAAGTGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGCGATCCGTTTGTAGGCTCCCTTACGTTTGTCAGGGTGTATGCTGGAAAGCTAAGTGCCGGGTCTTATGTACTCAATGCCAACAAAGGTAAAAAGGAGAGAATTGGTAGATTGCTAGAAATGCATGCAAACAGCAGAGAAGACGTTAAAGTAGCTTTGACCGGTGACATTATTGCTCTTGCTGGTTTAAAAGATACTATTACCGGTGAAACATTGTGTGACCCTGACAATCCGATCGTGCTTGAGCGCATGGACTTCCCTGATCCTGTCATCAAGGTTGCGATCGAACCCAAAACTAAAGCTGATGTTGACAGAATGGCTGCTGGTTTGATCAAGCTTGCACAGGAAGACCCTTCTTTCCACTTCTCCAGGGATGAAGAGATAAATCAAACAGTAATTGAAGGAATGGGAGAATTACATCTCGAAATCATTGTTGATCGGCTCAAAAGAGAATTTAAGGTGGAAGCTAATGTCGGCGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCTCGGAAGTCAAATATGTGCACAAGAAACAATCAGGTGGACAGGGTCAGTTTGCAGATATCACCGTACGGTTTGAACCCATGGATCCAGGGAGTGGATATGAGTTCAAGAGTGAAATTAAAGGAGGCGCTGTACCAAGAGAGTACGTTCCTGGAGTGATGAAAGGATTGGAAGAGTGTATGAGCAATGGTGTGCTTGCCGGTTTTCCAGTCGTTGATGTACGTGCGGTACTTGTCGACGGTTCGTACCACGATGTAGATTCAAGTGTATTGGCATTCCAGTTGGCAGCACGAGGAGCTTTCAGAGAAGGAATGAGAAAAGCTGGGCCACGGATGCTTGAGCCTATAATGAAGGTTGAGGTTGTTACTCCCGAGGAACATCTAGGTGATGTGATCGGTGATCTCAACTCAAGAAGAGGTCAGATCAACAGTTTTGGCGACAAACCTGGTGGCCTTAAGGTGGTCGACGCCCTAGTTCCTCTCGCCGAGATGTTCCAGTATGTCAGCACTCTAAGAGGAATGACAAAGGGACGTGCTTCATACACAATGCAACTAGCCATGTTTGATGTGGTGCCTCAGCATATTCAGAACCAACTTGCCTCAAAGGAGCAAGAAGTTGCTGCTTAA 3030 0.4525 MNIFFFITTNHTAESALTKPPPNNNPTTLDFIKSSCKSTLYPSLCIQSLTTYATTIRRSEKQLVLTALAVSTSTTQSCASFVRKMAKTKGINAREHRAVQDCIENMDDSVDRLSQSAKEIGLTGRAVGEDFAWHMSNVQTWVSAAMTDQSTCIDGFSGEFYRTDGRLKAAIRAKVVNASQVTSNALALVNRFASKHTLIEKPKNRAKNRAKKKQQQKKKKHPNNNTMATESLRVVTSSLCNLNGSQRRPTLFSPVRFMGLRPPRPSHSSSSSSSSLSNFFGSSRISVNSSKLHHLRQQGRRNFSVFAMSADETKRAVPLRDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVIQLPIGAEDTFKGVVDLVRMKAIVWSGEELGAKFDYEDIPADLQELAQEYRAQMIETIVELDDQAMENYLEGVEPDEETIKKLIRKGTISASFVPVLCGSAFKNKGVQPLLDAVVDYLPSPIELPPMKGTDPENPEATLERAASDDEPFSGLAFKIMSDPFVGSLTFVRVYAGKLSAGSYVLNANKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLCDPDNPIVLERMDFPDPVIKVAIEPKTKADVDRMAAGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPREYVPGVMKGLEECMSNGVLAGFPVVDVRAVLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQLASKEQEVAA* 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0298 1009 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 192 IPR035513 -
Aev01g0298 1009 CDD EF-G 324 594 - -
Aev01g0298 1009 SMART PMEI_2 27 188 IPR006501 GO:0004857
Aev01g0298 1009 CDD EFG_mtEFG_II 622 704 - -
Aev01g0298 1009 Pfam Elongation factor Tu GTP binding domain 321 593 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 Pfam Elongation factor G C-terminus 913 999 IPR000640 -
Aev01g0298 1009 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 363 378 IPR031157 -
Aev01g0298 1009 Hamap Elongation factor G [fusA]. 318 1004 IPR004540 GO:0003746|GO:0005525|GO:0006414
Aev01g0298 1009 MobiDBLite consensus disorder prediction 205 220 - -
Aev01g0298 1009 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 302 1002 - -
Aev01g0298 1009 Pfam Elongation Factor G, domain III 716 789 IPR041095 -
Aev01g0298 1009 CDD EFG_mtEFG_C 915 993 IPR035649 -
Aev01g0298 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 593 IPR027417 -
Aev01g0298 1009 CDD EFG_III 717 792 IPR009022 -
Aev01g0298 1009 Pfam Plant invertase/pectin methylesterase inhibitor 30 188 IPR006501 GO:0004857
Aev01g0298 1009 SMART EFG_C_a 912 1000 IPR000640 -
Aev01g0298 1009 SMART EFG_IV_2 792 910 IPR005517 GO:0005525
Aev01g0298 1009 SUPERFAMILY Ribosomal protein S5 domain 2-like 791 911 IPR020568 -
Aev01g0298 1009 Gene3D Elongation Factor G (Translational Gtpase), domain 3 720 796 - -
Aev01g0298 1009 SUPERFAMILY Translation proteins 576 716 IPR009000 -
Aev01g0298 1009 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 320 595 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 TIGRFAM EF-G: translation elongation factor G 315 1004 IPR004540 GO:0003746|GO:0005525|GO:0006414
Aev01g0298 1009 CDD PMEI-like_3 34 194 - -
Aev01g0298 1009 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 302 1002 - -
Aev01g0298 1009 Pfam Elongation factor G, domain IV 791 909 IPR005517 GO:0005525
Aev01g0298 1009 Gene3D - 797 1000 IPR014721 -
Aev01g0298 1009 PRINTS GTP-binding elongation factor signature 324 337 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 PRINTS GTP-binding elongation factor signature 370 378 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 PRINTS GTP-binding elongation factor signature 390 400 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 PRINTS GTP-binding elongation factor signature 406 417 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 PRINTS GTP-binding elongation factor signature 442 451 IPR000795 GO:0003924|GO:0005525
Aev01g0298 1009 MobiDBLite consensus disorder prediction 597 616 - -
Aev01g0298 1009 Gene3D - 313 604 IPR027417 -
Aev01g0298 1009 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 192 IPR035513 -
Aev01g0298 1009 Hamap Elongation factor G, chloroplastic. 312 1009 IPR030848 GO:0003746|GO:0006414|GO:0009507
Aev01g0298 1009 Pfam Elongation factor Tu domain 2 636 703 IPR004161 GO:0005525
Aev01g0298 1009 MobiDBLite consensus disorder prediction 197 229 - -
Aev01g0298 1009 Gene3D Translation factors 605 719 - -
Aev01g0298 1009 Gene3D - 916 987 - -
Aev01g0298 1009 SUPERFAMILY EF-G C-terminal domain-like 915 1004 IPR035647 -
Aev01g0298 1009 CDD EFG_mtEFG1_IV 795 910 IPR005517 GO:0005525
Aev01g0298 1009 SUPERFAMILY EF-G C-terminal domain-like 716 793 IPR035647 -
Aev01g0298 1009 TIGRFAM PME_inhib: pectinesterase inhibitor domain 4 190 IPR006501 GO:0004857
Aev01g0298 1009 TIGRFAM small_GTP: small GTP-binding protein domain 322 492 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0298 Aev-Chr1 2433614 2442851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0298 638 799 Eukaryotic Initiation Factors Gene Family AT3G22980 31.461 8.01e-11 64.3