Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0287 ATGGGTTCAGATCACAACGATAGCTACAAACCTTCGGAGCCAAAGCCATGTGCCAACAACTGCGGTTTTTTCGGAACCGCCGGGAACAAGAACCTCTGTTCAAAGTGCTACAGAGATTTGTGCCTTCAACAAGAGCGTGCTGCTTCCGCCAACAAAACCGCCGCTAAAATGACCGCCCCATCGCCTTCTCCGGCGACCCTCGATTCTGAAGTTACCACGGCGGCGTCGTCGTCATCATCATCGCTCTCCGGCTCCGGTACGGCGGCGGCATCGAACCGGTGCGAGAGTTGTAAGAAGAAGGTTGGGTTAACGGGTTTCGTGTGCAAGTGTGGGGCCACGTTCTGTGGGGTCCACCGGTACCCAGAGAAGCACGATTGTTCGTTCGATTTCAAAGGAACAGGGCGTGAAGCGATTTCGAAGGCTAATCCTGTTGTGAGATCCGACAAGATTCAAAGATTCTAG 462 0.5368 MGSDHNDSYKPSEPKPCANNCGFFGTAGNKNLCSKCYRDLCLQQERAASANKTAAKMTAPSPSPATLDSEVTTAASSSSSSLSGSGTAAASNRCESCKKKVGLTGFVCKCGATFCGVHRYPEKHDCSFDFKGTGREAISKANPVVRSDKIQRF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0287 153 ProSiteProfiles Zinc finger AN1-type profile. 88 134 IPR000058 GO:0008270
Aev01g0287 153 SUPERFAMILY AN1-like Zinc finger 87 148 IPR035896 -
Aev01g0287 153 ProSiteProfiles Zinc finger A20-type profile. 11 45 IPR002653 GO:0003677|GO:0008270
Aev01g0287 153 Gene3D - 1 63 - -
Aev01g0287 153 Pfam A20-like zinc finger 16 38 IPR002653 GO:0003677|GO:0008270
Aev01g0287 153 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 153 - -
Aev01g0287 153 Gene3D - 67 149 IPR035896 -
Aev01g0287 153 Pfam AN1-like Zinc finger 94 130 IPR000058 GO:0008270
Aev01g0287 153 SMART A20_3 14 38 IPR002653 GO:0003677|GO:0008270
Aev01g0287 153 MobiDBLite consensus disorder prediction 52 89 - -
Aev01g0287 153 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 153 - -
Aev01g0287 153 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 57 - -
Aev01g0287 153 SMART AN1_Zf_4 94 131 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0287 Aev-Chr1 2360388 2360849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0287 1 153 C2H2 Transcription Factor Family AT3G52800 39.181 1.31e-36 122