Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0268 ATGAACACCATTACTTTCCTACTCCTTCCCCTGTTTCTGCTATTTTCACTCCAAAATCCAAAATTGTTGGTTCAAGGAAACACAGAGTTAAGAGCTCTAATGGACCTGAAATCTTCTCTAGACCCAGAAAACAAGGTCCTTCTCTCATGGAGTAGTGATGGTGACCCATGTAGTGGTTCTTTTCTTGGTGTTGGTTGCAACCATCACCTCAAAGTTGCAAACATATCTTTGGCTGGAAGGGGTCTTTCTGGGAAGGTTTCTCCTTCAGTTTCTGAACTGAAATGCTTATCAGGGTTGTTCCTTCATTACAATAACATCTCTGGTGAGATACCAAGAGAGATTTCAAGTCTCACTGAATTGGTTGATCTTTATCTTAATGTCAATAACTTTTCTGGAATCATTCCTCCTCAGATTGCCAACCTCACTAGCTTAAAAGTGCTGCAGTTAGGATATAACCAGCTAGTAGGGAACATACCAAAGGAAATTGGTTTGATGAAGCAACTTAATGTTCTGGCTTTGCAACACAACAAACTAGCCGGTAACATTCCTCTTAACTTGTTGAACTTGGAGAATCTAAGGAGGCTAGATTTGAGCTTTAACAACCTCACCGGTATCATTCCGGCGACGCTAGCTGATATTGCATCCTTGGAAGTTCTAGATCTTCAAAACAATTCTCTATCAGGAACTGTTCCTTCTGGATTGAGGAAGTTAGGTAAAGGATTCCAAGGTGCAAACAATGCAGATCTATGTGGAGATGGATTCTCTCCTTTGAGAGCTTGCAATAATGATGCAGATATATACACAAGCCAGATATCAACCTCAAATGTATCTATAAACAATTTCTCTCCAAAAACTTTCCCAGATTCTGCATATACCAAATTGCCTTGTAACCAAACACATTGCTCAAAATCAAGAAGATTTCCTCAAGCTATCGTTGCGGCGAGTGTTATAACGGCCACTATCACACTCATAAGCGCCGGATTCGCTGCATATTTCAGATACCGGCGCCAAAAGCAGAGGATTAGGCATACATCAGAGTCTTCTGAAGGCCAATTTAGTCCTAACCAGCCTATAGAGTCTTATGGAAGAAGTCCATCACCACTTGTAAATCTTAACTACTATTATAATGGATTTGATCCATTGGATGATGGTCAAAATGGCAGTGAATATCTGAACAATTTCAGGTTCAATGTTGATGAGATCGAATCGGCAACGCAGTACTTATCAGAGGCCAATTTATTGGGTAAGAGCAAATTCTCAGCAGTGTATAAAGGAGTTCTGAGAGATGGTTCTGATGTGGCTATTAGAAGCATTAGTGTTACTTGTTGTAAACCTGAGGAAGGTGAATTTGTTGAGGGTTTGATTCTATTAACTTCATTGAGACATGAAAATATTGTGAAGATGAGAGGCTTTTGTTGCTCAAGTAGTAGAGGTGAATGTTATCTTGTCTATGAATTTGCTAATAATGGTAATCTCTCTCAATATCTTGACTTGGAAGATGGAAGTGATCATGTTCTTGAGTGGTCCAAGAGGGTTTCTATAATCAAGGGCATTGCAAAAGGTATTGGATACTTGCACAGCAAGGAACAGAGCAAACCAACAATAGTACACCAAAACATTTCTGTTGAAAAAGTTCTTCTAGACAATCAGTTCAATCCATTGATCATGGATGCAGGGCTACCAAAGCTTCTCGCAGACGACGTTGTTTTCTCGGCGCTGAAAGTAAGCGCCGCCATGGGGTACCTAGCACCGGAATACATAACAACTGGTCGCTTCACCGAGAAGAGCGACGTATACGCATTCGGTGTCATTGTTCTTCAAGTCCTGTCTGGGAAGACAGCAATAGGTGGTTCAATGAGGGTAGCAGTAGAGTCCTTCAGGTTTGAAGATTTTGTGGACACAAATTTGAAGGGAAGATATTCAAAATCTGAAGCAACAATTCTTTCAAAGCTTGCATTGCTATGCACACATGAACTTCATGATCAAAGGCCAAACATGGTGGAAGTGATTCAAGAATTGAGTGTGTTTTCTGCTCATTCTTCATGA 2046 0.4047 MNTITFLLLPLFLLFSLQNPKLLVQGNTELRALMDLKSSLDPENKVLLSWSSDGDPCSGSFLGVGCNHHLKVANISLAGRGLSGKVSPSVSELKCLSGLFLHYNNISGEIPREISSLTELVDLYLNVNNFSGIIPPQIANLTSLKVLQLGYNQLVGNIPKEIGLMKQLNVLALQHNKLAGNIPLNLLNLENLRRLDLSFNNLTGIIPATLADIASLEVLDLQNNSLSGTVPSGLRKLGKGFQGANNADLCGDGFSPLRACNNDADIYTSQISTSNVSINNFSPKTFPDSAYTKLPCNQTHCSKSRRFPQAIVAASVITATITLISAGFAAYFRYRRQKQRIRHTSESSEGQFSPNQPIESYGRSPSPLVNLNYYYNGFDPLDDGQNGSEYLNNFRFNVDEIESATQYLSEANLLGKSKFSAVYKGVLRDGSDVAIRSISVTCCKPEEGEFVEGLILLTSLRHENIVKMRGFCCSSSRGECYLVYEFANNGNLSQYLDLEDGSDHVLEWSKRVSIIKGIAKGIGYLHSKEQSKPTIVHQNISVEKVLLDNQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDVYAFGVIVLQVLSGKTAIGGSMRVAVESFRFEDFVDTNLKGRYSKSEATILSKLALLCTHELHDQRPNMVEVIQELSVFSAHSS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0268 681 Gene3D Transferase(Phosphotransferase) domain 1 487 681 - -
Aev01g0268 681 Pfam Leucine rich repeat 188 226 IPR001611 GO:0005515
Aev01g0268 681 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Aev01g0268 681 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Aev01g0268 681 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Aev01g0268 681 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Aev01g0268 681 Gene3D Ribonuclease Inhibitor 182 292 IPR032675 -
Aev01g0268 681 SUPERFAMILY Protein kinase-like (PK-like) 390 675 IPR011009 -
Aev01g0268 681 SMART LRR_typ_2 213 237 IPR003591 -
Aev01g0268 681 SMART LRR_typ_2 93 117 IPR003591 -
Aev01g0268 681 SMART LRR_typ_2 141 165 IPR003591 -
Aev01g0268 681 SMART LRR_typ_2 189 212 IPR003591 -
Aev01g0268 681 Gene3D Phosphorylase Kinase; domain 1 384 486 - -
Aev01g0268 681 MobiDBLite consensus disorder prediction 346 364 - -
Aev01g0268 681 PRINTS Leucine-rich repeat signature 192 205 - -
Aev01g0268 681 PRINTS Leucine-rich repeat signature 213 226 - -
Aev01g0268 681 SUPERFAMILY L domain-like 28 236 - -
Aev01g0268 681 MobiDBLite consensus disorder prediction 342 364 - -
Aev01g0268 681 ProSiteProfiles Protein kinase domain profile. 408 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0268 681 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 9 677 - -
Aev01g0268 681 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0268 Aev-Chr1 2166575 2170642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0268 1 521 Miscellaneous Gene Families AT4G22730 56.449 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aev01g0268 PK_Tyr_Ser-Thr 9.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0268 - - gmx:100784155 960.288