Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev01g0238 | ATGAGCGGGCAAGTTAGGAGAGAACGAAGGGATAATAGGTCAAGGGCTCCATCACAAGGTGCTCCACGTCAGGAATGGGTTCCTAGAGGATCATCGACCACCACTACTGTTCATCCATCAAATGTGCAGCCTGATCACAATGTTGGTTTTGCCAGTAGCTCCAACAATGGTGGTGCTGTTGCTGTTGTTCCAACTGTTCCAGCAACCGTTGCTCCGCCTGCGGTTCTCCATAATAGAAGCAACAATAGCTCTGTGAATCAGAGGAGGGAAAGGGATAAAGGGAGGAGTAGTGGTGGGAATCAGGTGGTGAAAGGGTCGAGATTGAGAGACTCTAATCTGCCTCAGTTGGTGCAGGAGATTCAGGAGAAGCTCATGAGAGGCACTGTGGAGTGCATGATTTGCTATGACATGGTCTGGAGGTCAGCGCCAGTTTGGTCTTGCTCGAGTTGCTACTCTATCTTTCACTTGAATTGCATCAAGAAGTGGGCTCGTGCGCCTACTTCGGTTGACTTGTCAGCGGAGAAGAATCAAGGGTTTAATTGGCGGTGTCCCGGTTGTCAGTCTGTGCAGCTCACGTCGTCGAAGGAGATTAGGTATGTTTGCTTTTGTGGGAAGAGGATGGATCCTCCATCTGATTTGTATTTGACGCCACATTCATGTGGAGAACCATGTGGTAAGGCTCTTGAGAGGGAGGTGTTGGTTATTGGAGGCAGTAAAGAAGACCTTTGTCCTCATGTTTGTGTCCTGCAGTGCCATCCGGGTCCTTGTCCTCCTTGTAAAGCATTTGCCCCTCCACGCTTGTGTCCTTGTGGAAAGAAAACTATTACCACTCGTTGCTCTGATCGGCAGTCTGTTCTTACCTGTGGCCAGCGCTGTGAGAAGCTTCTTGAATGTGGGCGTCACCGCTGTGAACGCATTTGTCATGTGGGTGCATGTGATCCTTGTGATGTTCTGATCAATGCCTCTTGCTTTTGCAGTAGAAAAAATGAGGTTATTCCATGTGGGGATATGGCTATGAAGGGTGAATTTAAATCGGAAGATGGAGTTTTTTCTTGTGGTTCCAATTGTGGAAGGAAGCTTACCTGTGGTAATCATATCTGCATTGAGATTTGTCATCCAGGAAGTTGTGGGCAGTGTGATTTGTTACCAAGCCGTGTTAAGACATGCTGTTGTGGGAAAACAAGATTGGCCGAGGAACGCCAGAGTTGCCTGGACCCGATACCTACCTGCTCACAAGTATGTGGAAAGTCCCTTCCTTGTGGGATACATCATTGTGAAGAGCAATGTCATGTTGGGGATTGTCCACCTTGTTTGGTTCTAGTTACCCAGAAGTGCCGTTGTGGCTCAACTTCCCGAACTGTGGAGTGCTACAGGAAAACAGTAGGAAATGAGAATTTTACTTGTGAAAAGCCCTGTGGGAGAAAAAAGAATTGTGGAAGACATCGGTGTAGTGAACGGTGTTGTCCACTTTCTAATCCTGGTAATAATCTAAGTGGGGATTGGGATCCTCACTTTTGTTCGATGCCATGTGAAAAGAGGCTAAGGTGTGGCCAGCATCCATGTGAATCACTATGCCACAGCGGCCATTGCCCACCTTGTCTTGAAACCATCTTTACCGATTTGACATGTGCTTGTGGTAGGACTTCAATCCCTCCTCCACTGCCTTGTGGTACACCGCCTCCTTCATGTCAGCTCCCGTGTTCAGTTCCTCAGACTTGTGGCCATTCAGCCTCGCACAGTTGCCATTTTGGAGACTGCCCTCCATGTTCAGTGCCGGTAGCAAAAGAATGTATTGGTGGGCACGTTGTTCTTAGGAACATACCTTGTGGGTCTAAGGATATTCGATGCAATAAGCTTTGTGGGAAGACTAGACAGTGTGGCCTCCATGCATGTGGCAGAACATGTCACCCCCCTCCTTGTGATAATATATCTGGCACTGTGCAAGGATTACCTGCACCTTGTGGGCAAACATGTGGTGCTCCGAGGAGAGACTGCCGTCATACATGTACGACTCCTTGTCACCCTTCTTCTCCTTGCCCTGATATAAGATGTGAGTTCCCTGTCACAATTACATGTTCTTGTGGCCGTATAACTGCAAGTGTTCCTTGTGATGCTGGTGGTAGCAGTGGTAATTATAACGCTGATGCTGTACATGAGGCTTCCATTACTCAAAAATTGCCTGTGCCACTTCAACCAGTTGAAGCAAATGGAAAAAAAGTTTCTCTTGGACAAAGAAAGCTGATGTGTGATGATGAATGTGCTAAGTTAGAGCGTAAGAAGGTTCTTGCTGATGCTTTTGATATCACTGCTCCCAATCTTGATGCCCTCCATTTTGGTGAGAATTCTGGTGAATTGATTTCTGACTTGTTAAGGCGCGATCCTAAATGGGTATTATCTGTTGAGGAGAGATGCAAATTTTTAGTGCTTGGCAAGAGCAGAGGGACTACACATGGCTTGAAAGTGCATGTTTTCTGTCCTATGCTGAAGGAGAAAAGAGATGCAGTGAGGGTGATTGCTGAGAGATGGAAGCTTGCTGTGAGTGCTGCTGGTTGGGAGCCAAAGCGTTTTATTGTAATTCATGTTACTCAAAAATCAAAAGCCCCAGCTCGTGTGCTAGGGGTTAAGGGAACCACAACTGTAAATGTGCCCCTTCCTCCTGCATTCGATCCCTTGGTAGACATGGACCCTCGGCTTGTTGTTTCCTTTCCGGACTTACCAAGGGAGGCTGACATTAGTGCCTTGGTGTTGAGATTTGGTGGTGAGTGTGAGCTTGTCTGGTTGAATGACAAAAACGCGTTGGCTGTTTTCCATGATCCTGGTAGAGCTGCAACTGCAATGAGGAGGTTGGATCATGGAACAATTTATCAGGGAGCTGTTTTGGTTGCCCCGAATGCGTCTGCCGCGTCATCAGCCACAAGTGCTTGGGGAGGAGCTGGGACAATGAAAGAGGGAGGAGCGCTGTCAGTGTTGAAAGGTAATCCATGGAAAAAGGCTGTAGTTCAAGAGCCTAGTTGGAGAGAAGATTCTTGGTGCGATGAGGAATGGACTACTGGTTCTGCTAATATCCAGTCTCCTGCATGGAAGAAAGAAACACCGATAACTGCATCATTTAACCGATGGAACATCTTGGACCATGAATCGAGTTCAGGTTCATCGTCTTCTGCGACTGCCAGAGCTGAAGTTTCTTGGAAACATGCCGAAAGCAGTGCTGTGTCGAGGCCAGAGTCTCATGCAGGCATCTCAAATCAAGAAGGACTACCTGGAGGGAACTTAGCTGCAACCGCTGAAGCTTCTGAAGTAGTAGATGATTGGGAGAAGGCTTATGAATGA | 3330 | 0.4751 | MSGQVRRERRDNRSRAPSQGAPRQEWVPRGSSTTTTVHPSNVQPDHNVGFASSSNNGGAVAVVPTVPATVAPPAVLHNRSNNSSVNQRRERDKGRSSGGNQVVKGSRLRDSNLPQLVQEIQEKLMRGTVECMICYDMVWRSAPVWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNQGFNWRCPGCQSVQLTSSKEIRYVCFCGKRMDPPSDLYLTPHSCGEPCGKALEREVLVIGGSKEDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSDRQSVLTCGQRCEKLLECGRHRCERICHVGACDPCDVLINASCFCSRKNEVIPCGDMAMKGEFKSEDGVFSCGSNCGRKLTCGNHICIEICHPGSCGQCDLLPSRVKTCCCGKTRLAEERQSCLDPIPTCSQVCGKSLPCGIHHCEEQCHVGDCPPCLVLVTQKCRCGSTSRTVECYRKTVGNENFTCEKPCGRKKNCGRHRCSERCCPLSNPGNNLSGDWDPHFCSMPCEKRLRCGQHPCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPPPSCQLPCSVPQTCGHSASHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPPPCDNISGTVQGLPAPCGQTCGAPRRDCRHTCTTPCHPSSPCPDIRCEFPVTITCSCGRITASVPCDAGGSSGNYNADAVHEASITQKLPVPLQPVEANGKKVSLGQRKLMCDDECAKLERKKVLADAFDITAPNLDALHFGENSGELISDLLRRDPKWVLSVEERCKFLVLGKSRGTTHGLKVHVFCPMLKEKRDAVRVIAERWKLAVSAAGWEPKRFIVIHVTQKSKAPARVLGVKGTTTVNVPLPPAFDPLVDMDPRLVVSFPDLPREADISALVLRFGGECELVWLNDKNALAVFHDPGRAATAMRRLDHGTIYQGAVLVAPNASAASSATSAWGGAGTMKEGGALSVLKGNPWKKAVVQEPSWREDSWCDEEWTTGSANIQSPAWKKETPITASFNRWNILDHESSSGSSSSATARAEVSWKHAESSAVSRPESHAGISNQEGLPGGNLAATAEASEVVDDWEKAYE* | 1110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev01g0238 | 1109 | MobiDBLite | consensus disorder prediction | 1064 | 1109 | - | - | |
| Aev01g0238 | 1109 | ProSiteProfiles | Zinc finger PHD-type profile. | 128 | 189 | IPR019787 | - | |
| Aev01g0238 | 1109 | CDD | RING-CH-C4HC3_NFX1 | 130 | 187 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 654 | 703 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 352 | 395 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 220 | 281 | - | - | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 665 | 686 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 362 | 381 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 478 | 512 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 573 | 591 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 626 | 656 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 298 | 317 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 516 | 535 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 420 | 439 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SMART | znfxneu3 | 243 | 261 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 288 | 336 | - | - | |
| Aev01g0238 | 1109 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 | 83 | 1106 | IPR034078 | GO:0003700 | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 506 | 549 | - | - | |
| Aev01g0238 | 1109 | PANTHER | NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 | 83 | 1106 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 468 | 527 | - | - | |
| Aev01g0238 | 1109 | Coils | Coil | 1101 | 1109 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 410 | 458 | - | - | |
| Aev01g0238 | 1109 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Aev01g0238 | 1109 | CDD | NF-X1-zinc-finger | 563 | 611 | - | - | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 626 | 641 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 658 | 683 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 516 | 533 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 298 | 315 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 478 | 489 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 362 | 379 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 573 | 590 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 420 | 437 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | Pfam | NF-X1 type zinc finger | 245 | 260 | IPR000967 | GO:0005634|GO:0008270 | |
| Aev01g0238 | 1109 | SUPERFAMILY | RING/U-box | 120 | 190 | - | - | |
| Aev01g0238 | 1109 | MobiDBLite | consensus disorder prediction | 71 | 108 | - | - | |
| Aev01g0238 | 1109 | ProSiteProfiles | Zinc finger RING-type profile. | 131 | 187 | IPR001841 | - | |
| Aev01g0238 | 1109 | MobiDBLite | consensus disorder prediction | 25 | 53 | - | - |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | NF-X1 | Aev01g0238 | zf-NF-X1 | 51 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev01g0238 | K12236 | - | zju:107419567 | 1776.53 |