Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0234 ATGCTCGTTGAGGGTGCGGAAATCAATATTGCATCAATGGCTCAAGATACTTCTGGTGACGATTCGCCTAATAGGCGCCTTGGTCTTTTGAAGGATCAAGTTCATTCTGTTAAAAGGAAAGACTCGGATCGCTGTGAGATTGCTCCAATCAAAGATAAGTTATCATTTGAGAAGGGCTTCTTCATAGTGATCCGAGCATGCCAGTTGTTGGCGCAGACGAACGATGGAGTGATCTTGGTAGGAGTTGCAGGTCCTTCAGGAGCTGGGAAGACTATGTTTACTGAAAAGATAGTCAATTTCATGCCAAGCATTGCAGTTATTTCCATGGACAATTACAATGATGCGAGTCGCCTCGTCGATGGAAACTATGATGATCCACGGTTAACAGATTATGAAACTCTGCTCCAAAATGTATATGATCTAAAGGAAGGAAAGCCAGTTGAAGTTCCAATATATGATTTCAAGTCTAGTTCAAGAACAGGATACAGGACCGTCGAAGTTCCAAGCTCTCGAATTGTGATTATAGAGGGCATCTACGCCTTGAGCGAGAGGCTGCGGCCGCTACTAGACCTCCGAGTATCTGTCACCGGCGGAGTTCACCTTGACCTTGTCAAGCGAGTCATGCGTGACATACAAAGAGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAAACAGTATATCCAATGTACAAGGCCTTTATTGAGCCTGATCTCAAAACTGCACATATAAAGATCATCAACAAGTTCAATCCATTTACTGCATTCCAAAGTCCTATATACATATTGAAGTCAGCAAGGAAGGTAATAGTGGATCAAATCAAAGCTGTTATGTCCAAAGATATCACTGAGAAAATGGAGCAGACTTATGATATATATCTTCTACCTCCTGGTGAAGATCCAGAAAGTTGCCAATCATATTTACGGATGCGAAACACGGATGGGAAATACAGTCTCATGTTTGAGGAATGGATGACAGATGATCCATTTGTGATATCGCCAAGAATTACATTTTCGGTCAGCGTTCGCCTCCTTGGTGGACTAATGGCGTTGGGATACACAATAGCAACTATCCTTAAAAGAAACAGTCATGTCTTTTCTGATGATGATGGTGTTTGTGTGAAACTAGATTGGCTCGAGCAACTTAATCGACATTATGTTCAGGTAATCGGAAAAGATCGGTTACTTGTGACAAACAAAGCACAACAGTTAGGTCTAGAAGGTTCCTACATTCCTCGAACCTACATTGAGCAGATTCAGTTTGAAAAGCTTATAAATGAGGTTATGGCCTTGCCGGAAGACTTGAAGAGAAAGCTTAGCCTTGATGAAAATTTTGTGGCAAGTCCCAAAGGAGAACTTTTTGGAGCCTCTGCTGAACAGGTTTCCTTGAGACACAAGAAACTAAGGAGTGGTTTGTCCAAGTCATTTACAAATCTAAGGGACAAGAATCAAGCCAAACTTAATGGATATGTTTCCAACAATGAAGAGCTTCATGAAATAGATAATTCAGATTCCCCCAGAACATTAGGAAATCAGTATTTTGGACCTGAGCAAGGAGCAATCACTCAACTTTCAGAAGAAATTTCTTCCCTAAATCATAGAATGGATGATTTTACAAACCATATTGAAGCACTTAACTCCAAGTTATCTATGAAGGAAAATTGTCTATTGCTACAAGAATTTCCCCTGCAGGCTGAGTCTTGCAATGGTTCTTGGTCCTCATCACAATCAACTAAGGACTCAGCTTTAATAAAAGAGATATCAGGTATTGTACAAGGTCAGAGTCAGATCATGCATCAATTGGACAATCTCAACAAATATTTGCAAGGGAACTTGGGAGATTGGTCTCAGTCTCAGCAAACAAGAACCAAGAAGAAAGGTGTCTTAGATTCTATTGGATCACATGTTATGGTAGGGTTGGCTATTGGTGGTTTAGGGATCTTCTTGATGAAGGGTTTCTTCACCAGAAACTGA 1980 0.4071 MLVEGAEINIASMAQDTSGDDSPNRRLGLLKDQVHSVKRKDSDRCEIAPIKDKLSFEKGFFIVIRACQLLAQTNDGVILVGVAGPSGAGKTMFTEKIVNFMPSIAVISMDNYNDASRLVDGNYDDPRLTDYETLLQNVYDLKEGKPVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHLDLVKRVMRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKIINKFNPFTAFQSPIYILKSARKVIVDQIKAVMSKDITEKMEQTYDIYLLPPGEDPESCQSYLRMRNTDGKYSLMFEEWMTDDPFVISPRITFSVSVRLLGGLMALGYTIATILKRNSHVFSDDDGVCVKLDWLEQLNRHYVQVIGKDRLLVTNKAQQLGLEGSYIPRTYIEQIQFEKLINEVMALPEDLKRKLSLDENFVASPKGELFGASAEQVSLRHKKLRSGLSKSFTNLRDKNQAKLNGYVSNNEELHEIDNSDSPRTLGNQYFGPEQGAITQLSEEISSLNHRMDDFTNHIEALNSKLSMKENCLLLQEFPLQAESCNGSWSSSQSTKDSALIKEISGIVQGQSQIMHQLDNLNKYLQGNLGDWSQSQQTRTKKKGVLDSIGSHVMVGLAIGGLGIFLMKGFFTRN* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0234 659 Pfam CYTH domain 282 417 IPR023577 -
Aev01g0234 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 248 IPR027417 -
Aev01g0234 659 Coils Coil 523 550 - -
Aev01g0234 659 CDD UMPK_like 79 251 - -
Aev01g0234 659 PRINTS Uridine kinase signature 200 210 - -
Aev01g0234 659 PRINTS Uridine kinase signature 144 159 - -
Aev01g0234 659 PRINTS Uridine kinase signature 236 249 - -
Aev01g0234 659 PRINTS Uridine kinase signature 77 94 - -
Aev01g0234 659 PANTHER URIDINE KINASE 15 579 - -
Aev01g0234 659 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 15 579 - -
Aev01g0234 659 ProSiteProfiles CYTH domain profile. 264 423 IPR023577 -
Aev01g0234 659 Gene3D - 77 288 IPR027417 -
Aev01g0234 659 SUPERFAMILY CYTH-like phosphatases 285 420 IPR033469 -
Aev01g0234 659 Pfam Phosphoribulokinase / Uridine kinase family 80 248 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0234 Aev-Chr1 1906549 1912421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0234 78 248 PRT Gene Family AT5G40870 28.333 3.96e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0234 K00876 - gmx:100797542 919.457