Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0204 ATGAAGAAAATGGAAATATCTGCTAATTATGATCCCGGTGCTAGTAGTGATCGTCAGATGGGCTCATCGGAGCCGGTAATCGCTCCCTCTAACACTGCAAGCAGCAGGGAACCAGTAAACAAGTGGATGGCATTTTCTAGGGAGTCTGATTTCACCAATGATGCTAACTCTATGATGGTAAATCTTTCTGGGACTAAAAGTGTAGTGAAAGACAATCAGCAAAATGGGGCATCATCTTCGGATAATCGAATTCTAACTGGAGCAAACATAGCTGAGAGAGCTGCTGAATGGGGTCTTGTAGTGAACACAGGCAGTTTTAAAGCAATAGCAGGAGAGAAATCAAGCTCATCTAATGATGGTGACAGGAGTAGACTCTCGGATCGGTTTGTTGAATCAGCAAGGACGTCCGGGGAGTCAAATTATGGATCCGAGTCAGGGGCGTTCCCAAGGGTCTCACAAGAGTTGAAGGAAGCATTGGCAACGCTGCAACAGACGTTTGTCGTCTCGGATGCAACCAAGCCGGATTGTCCAATCATGTATGCCAGCAGTGGATTTTTTACTATGACTGGTTACGCTACAAAGGAGGTTATTGGAAGGAATTGTCGATTTCTTCAGGGGCCTGAAACAGACCAGAAAGAAGTGGAGAAAATTCGGGATGCGACTAGAAATGGGAAAAGTTATTGTGGCAGGCTTTTGAACTACAAGAAAAATGGAACTCCTTTCTGGAATCTTCTCACTATCACACCCATCAAAGATGACAGTGGCAAAACTATCAAATTCATTGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGTGTGAGTGAAAAGGCGTTGCGACCAAATGGATTGCCTACATCATTAATTCGTTACGATGCTCGTCAGAAGGAGAGAGCTTTGGGTTCCATCACTGAGGTTGTCCAAACTGTGAAGCACCCGCCGAAATCCATTAGTCGGGTTATGCATGATCAAATTGCCTCCAAGCATGAAGAGCAGGAGAAGTCTGATTTTGAATTTGTTTTGCCAAAGTCTGCTGAAGTTGGGAATACAAGTTCACTCGGTAAACAAACTTCTCCACCGGATTTCGAAAGTGGTGCATCACGCTTGAGCTCTTATCAGGATAGAAACAAGGATTCAAGAAAATCAGCACGGATTTCTCTGAAGGGTTTTAAAGGGAGAGATGAGAAGCCAATTGTTGAACCCGAGGTTTTGATGACCAAGGAAATAGCGCGGATTGATAGTTGGGAGCGTGCTGAAAGAGAGAGGGATATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGCGAATAGAAAAGAATTTTGTGATTTCTGATCCAAGACTTCCAGATAACCCAATTATATATGCATCAGATAGCTTTCTTGAACTTACTGAATATACGCGAGAAGAAATTCTGGGACGAAACTGTCGGTTTCTTCAAGGGCCAGAAACAGATCAAGGAACTGTTTCAAATATTAGAGATGCTATCAGAGAACAGAGGGAAATCACTGTTCAGTTAATCAATTATACTAAGAGTGGAAAGAAGTTCTGGAATTTGTTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGTGTTCAATTAGATGGAAGCGATCATGTCGAACCCTTAAAAAATCGTCTGTCTGAGACAGCCGAGAAACAAAGTGCCAAGTTGGTAAAAGCTACTGCAGAAAATGTTGATGAAGCTGTCCGCGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCAACCTGTGTTTCCACGACCGCACAAAAAGGACAATCCTTCTTGGGTAGCAATACAAAAGATAGCTGCAAGGGGCGAAAAAATTGGCCTGCATCATTTCGTGCCCATTAGGCCATTGGGTTGTGGAGATACCGGAAGTGTTCATTTGGTGGAACTCGAAGGTACCAGCGAACTATATGCAATGAAGGCAATGGAAAAGTCGGTTATGCTAAATCGTAACAAGGTTCACCGAGCATGCATTGAGAGAGAGATTATATCACTACTAGATCATCCTTTTCTTCCAACATTATACACTTCATTTCAGACTTCTACGCATGTATGTTTGATTTCTGATTTCTGCCCTGGGGGAGAGTTGTTTGCCTTGCTTGACAAGCAACCGATGAAGATTTTCAAAGAGGAATCGGCAAGATTCTATGCAGCAGAGGTTGTGATTGGTTTGGAATATCTTCACTGTTTAGGTATAATCTATAGAGACTTGAAGCCTGAAAATATATTACTTAACAAGGATGGCCATGTTGTATTGACTGATTTTGATCTATCCTTTATGACAACTTGTAAACCTCAGGTTGTGAAGCCTCCACCGACTAGCAGTAGAAGAAGATCACGGGGTCAACCGCCACCAACATTTGTTGCAGAGCCAGTTTCACAATCAAATTCATTTGTTGGAACTGAAGAATACATTGCTCCTGAAATTATAACTGGAGCAGGGCACTCTAGTGCTATTGATTGGTGGACACTTGGTATCTTGTTGTATGAGATGCTCTATGGTCGTACCCCGTTCAGAGGAAAGAACAGACAGAAGACATTTTCCAACATCTTGCACAAGGATCTTACATTTCCAAGCAGCATCCCGGCAAGCCTTGCAGCCAGGCAATTGATTAATGCACTGTTGCAAAGAGACCCGGCAAATCGTCTAGGTTCAAGTACTGGTGCCAACGAAATCAAACAACATCCATTTTTCCGCGGAATCAGTTGGCCTTTAATCCGCAACATGAGTCCACCCCAATTAGATGTTCCTCTTCAATTGATAGGAAAAGATCCAAAAGCTAAGGATATAAAGTGGGAAGATGATGGTGTCCTTGCTACCTCAATTGATATGGATAATATTTTCTGA 2895 0.4283 MKKMEISANYDPGASSDRQMGSSEPVIAPSNTASSREPVNKWMAFSRESDFTNDANSMMVNLSGTKSVVKDNQQNGASSSDNRILTGANIAERAAEWGLVVNTGSFKAIAGEKSSSSNDGDRSRLSDRFVESARTSGESNYGSESGAFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFTMTGYATKEVIGRNCRFLQGPETDQKEVEKIRDATRNGKSYCGRLLNYKKNGTPFWNLLTITPIKDDSGKTIKFIGMQVEVSKYTEGVSEKALRPNGLPTSLIRYDARQKERALGSITEVVQTVKHPPKSISRVMHDQIASKHEEQEKSDFEFVLPKSAEVGNTSSLGKQTSPPDFESGASRLSSYQDRNKDSRKSARISLKGFKGRDEKPIVEPEVLMTKEIARIDSWERAERERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIYASDSFLELTEYTREEILGRNCRFLQGPETDQGTVSNIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETAEKQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKDNPSWVAIQKIAARGEKIGLHHFVPIRPLGCGDTGSVHLVELEGTSELYAMKAMEKSVMLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTSTHVCLISDFCPGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLNKDGHVVLTDFDLSFMTTCKPQVVKPPPTSSRRRSRGQPPPTFVAEPVSQSNSFVGTEEYIAPEIITGAGHSSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPANRLGSSTGANEIKQHPFFRGISWPLIRNMSPPQLDVPLQLIGKDPKAKDIKWEDDGVLATSIDMDNIF* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0204 964 CDD PAS 449 541 IPR000014 -
Aev01g0204 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Aev01g0204 964 PANTHER BNAA02G07840D PROTEIN 108 961 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 1 40 - -
Aev01g0204 964 ProSiteProfiles PAC domain profile. 500 554 IPR000700 -
Aev01g0204 964 Gene3D PAS domain 415 579 - -
Aev01g0204 964 ProSiteProfiles Protein kinase domain profile. 627 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0204 964 MobiDBLite consensus disorder prediction 782 808 - -
Aev01g0204 964 Coils Coil 550 570 - -
Aev01g0204 964 Pfam Protein kinase domain 630 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0204 964 SUPERFAMILY Protein kinase-like (PK-like) 607 939 IPR011009 -
Aev01g0204 964 SUPERFAMILY PYP-like sensor domain (PAS domain) 172 264 IPR035965 -
Aev01g0204 964 MobiDBLite consensus disorder prediction 117 131 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 110 147 - -
Aev01g0204 964 Gene3D Transferase(Phosphotransferase) domain 1 711 927 - -
Aev01g0204 964 SUPERFAMILY PYP-like sensor domain (PAS domain) 445 541 IPR035965 -
Aev01g0204 964 MobiDBLite consensus disorder prediction 132 147 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 373 387 - -
Aev01g0204 964 Gene3D Phosphorylase Kinase; domain 1 626 710 - -
Aev01g0204 964 SMART pas_2 153 222 IPR000014 -
Aev01g0204 964 SMART pas_2 428 497 IPR000014 -
Aev01g0204 964 ProSiteProfiles PAS repeat profile. 151 224 IPR000014 -
Aev01g0204 964 ProSitePatterns Protein kinases ATP-binding region signature. 633 656 IPR017441 GO:0005524
Aev01g0204 964 CDD PAS 178 267 IPR000014 -
Aev01g0204 964 Pfam PAS domain 449 541 IPR000014 -
Aev01g0204 964 Pfam PAS domain 172 268 IPR000014 -
Aev01g0204 964 ProSiteProfiles PAC domain profile. 225 279 IPR000700 -
Aev01g0204 964 TIGRFAM sensory_box: PAS domain S-box protein 452 543 IPR000014 -
Aev01g0204 964 TIGRFAM sensory_box: PAS domain S-box protein 177 268 IPR000014 -
Aev01g0204 964 PANTHER FLIPPASE KINASE 1-RELATED 108 961 - -
Aev01g0204 964 SMART pac_2 228 270 IPR001610 -
Aev01g0204 964 SMART pac_2 503 545 IPR001610 -
Aev01g0204 964 MobiDBLite consensus disorder prediction 12 39 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 348 372 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 783 797 - -
Aev01g0204 964 MobiDBLite consensus disorder prediction 348 387 - -
Aev01g0204 964 Gene3D PAS domain 165 339 - -
Aev01g0204 964 ProSiteProfiles PAS repeat profile. 426 499 IPR000014 -
Aev01g0204 964 CDD STKc_phototropin_like 625 937 - -
Aev01g0204 964 SMART serkin_6 627 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0204 Aev-Chr1 1612209 1620587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0204 71 961 AGC Kinase Gene Family AT5G58140 72.345 0.0 1306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aev01g0204 Pkinase 7.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0204 K20715 - gmx:100804783 1540.78