Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0196 ATGGGTTCTTGCTTTTCATCTACCAAAGTCAGTGGTGCCTCCAATACGACGTCGCACCACCACCAAAAACGGCAACCACCACCACCGCACAAGGCAACTTCAACTTCGAGGCACGTGCCGTGTGGCAGGAGAACCGATTTCGGCTACGACAAGGATTTTGGCGATCGTTACACTTTGGGCAAGTTGTTAGGGCATGGCCAATTTGGTTACACCTTTGTTGGAATTGACAAGCTTCATGCCAATCGCGTTGCTGTTAAGAGGCTCGATAAGACTAAGATGGTTCTCCCCATAGCTGTTGAGGATGTTAAGCGAGAAGTCAAGATATTGAAAGCACTTGCCGGCCATGAGAATGTAGTTCAGTTCTATAATGCTTTTGAAGATGATTCGTATGTGTATATAGTTATGGAGTTGTGCGAAGGTGGAGAACTGCTAGACCGGATATTGGCAAAGAAGAACAGCCGATATACTGAAAAAGATGCAGCAGTGGTTGTAAGGCAAATGCTCAAGGTCGCAGCTAAGTGTCATTTACATGGTTTGGTACACCGGGACATGAAACCAGAGAATTTTCTTTTCAAATCATCCAAAGAAAATTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAACCTGGAAAGAAGTTTCATGATATTGTTGGCAGTGCTTATTACGTTGCTCCCGAAGTTTTAAAACGGAAGTCAGGCCCTGAATCAGATGTGTGGAGTATCGGTGTTATTACATACATATTGTTATGTGGGAAACGCCCATTTTGGGACAAGACTGAGGATGGTATTTTCAAGGAGGTCTTACGTAACAAGCCTGATTTCCGCAGGAAACCATGGCCAACTATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGCTGGTAAAAGATCCCCGGGCAAGATTAACTGCTGCTCAGGCTCTGTCACATCCATGGGTTAGAGAAGGAGGAGAAGCATCGGAGATTCCTATTGATATATCTGTTCTGAGCAACATGCGGCAGTTTGTGAAGTATAGTCGATTGAAACAGTTCGCACTGAGGGCACTGGCTAGCACACTTAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCAATAGACGTCGACAAAAATGGTTCTATTAGTCTCGAAGAGATGAGACAGGCTCTTGCTAAAGATCTACCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATATTGCAAGCGATAGATAGCAATACAGATGGTCTGGTGGATTTTACTGAGTTTGTGGCTGCTACATTACATGTGCATCAATTGGAGGAACACGACTCTGCAAAGTGGCAGCAGCGGTCGCAGGCTGCTTTTGAGAAATTCGACATAGACAAGGATGGCTATATTACTCCAGAAGAACTTAGAATGCATACGGGTTTAAGAGGCTCCATTGATCCTCTGCTTGAGGAAGCCGACATCGACAAAGACGGAAAAATCAGCTTGCCAGAGTTTCGGAGACTCCTAAGAACCGCAAGCATCGGTTCTCGAAATTTGCCAAGCCCCACCAGCCATCGGCGTACGATCTTAGACTAG 1563 0.4421 MGSCFSSTKVSGASNTTSHHHQKRQPPPPHKATSTSRHVPCGRRTDFGYDKDFGDRYTLGKLLGHGQFGYTFVGIDKLHANRVAVKRLDKTKMVLPIAVEDVKREVKILKALAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYTEKDAAVVVRQMLKVAAKCHLHGLVHRDMKPENFLFKSSKENSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGKRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSAKWQQRSQAAFEKFDIDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNLPSPTSHRRTILD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0196 520 SUPERFAMILY EF-hand 346 500 IPR011992 -
Aev01g0196 520 Gene3D Phosphorylase Kinase; domain 1 50 142 - -
Aev01g0196 520 SMART efh_1 443 471 IPR002048 GO:0005509
Aev01g0196 520 SMART efh_1 401 429 IPR002048 GO:0005509
Aev01g0196 520 SMART efh_1 364 392 IPR002048 GO:0005509
Aev01g0196 520 SMART efh_1 473 501 IPR002048 GO:0005509
Aev01g0196 520 ProSiteProfiles Protein kinase domain profile. 57 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0196 520 ProSiteProfiles EF-hand calcium-binding domain profile. 477 504 IPR002048 GO:0005509
Aev01g0196 520 MobiDBLite consensus disorder prediction 1 32 - -
Aev01g0196 520 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Aev01g0196 520 Pfam EF-hand domain pair 445 498 IPR002048 GO:0005509
Aev01g0196 520 Pfam EF-hand domain pair 364 426 IPR002048 GO:0005509
Aev01g0196 520 Pfam Protein kinase domain 57 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0196 520 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Aev01g0196 520 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Aev01g0196 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Aev01g0196 520 Gene3D - 358 427 - -
Aev01g0196 520 MobiDBLite consensus disorder prediction 1 43 - -
Aev01g0196 520 CDD STKc_CAMK 56 316 - -
Aev01g0196 520 SMART serkin_6 57 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g0196 520 ProSiteProfiles EF-hand calcium-binding domain profile. 439 474 IPR002048 GO:0005509
Aev01g0196 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 508 - -
Aev01g0196 520 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Aev01g0196 520 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 32 508 - -
Aev01g0196 520 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Aev01g0196 520 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Aev01g0196 520 SUPERFAMILY Protein kinase-like (PK-like) 53 331 IPR011009 -
Aev01g0196 520 Gene3D Transferase(Phosphotransferase) domain 1 143 338 - -
Aev01g0196 520 Gene3D - 339 497 - -
Aev01g0196 520 ProSitePatterns EF-hand calcium-binding domain. 452 464 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0196 Aev-Chr1 1550156 1554468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0196 15 514 EF-hand Containing Proteins AT2G17890 81.336 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aev01g0196 Pkinase 4.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0196 K13412 - gmx:100798941 907.131