Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0187 ATGCTCTCACCATCGTTCCCTTCTTCTTCTTCTTCTTCTCTCACTGCCACCATCACCAATCAGTCTTCGCCGCCGCGCTACGGTAGATACCGATCAGAACTCTCCACCGCCGCTGCTGCCGGAGCCACCACTCCTTCAACGGCGTCGTTCTACGAGATTCTCGAGATCCCCGCCTCCGCTTCGAGCGGCGAGATCAAGGCGGCGTACCGGCGACTTGCCAGAGTCCACCACCCCGACACGGCGGCGATCGGAGATCGAAACGATTCGGCGGCGGCGGCGGCGGACGAGTTCATGAAGCTCCACGCGGCGTACAGCACACTATCGGATCCCCAGAAGAGAGCAAGCTACGACAGGAGCTTGTTCCGGAGGCTTCAGCGGCCGCTTACGGCGGGGAATTCGACGGCGGCGAGATTTTCCGGCTATAGTGGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 459 0.6144 MLSPSFPSSSSSSLTATITNQSSPPRYGRYRSELSTAAAAGATTPSTASFYEILEIPASASSGEIKAAYRRLARVHHPDTAAIGDRNDSAAAAADEFMKLHAAYSTLSDPQKRASYDRSLFRRLQRPLTAGNSTAARFSGYSGRNWETDQCW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0187 152 CDD DnaJ 50 109 IPR001623 -
Aev01g0187 152 SUPERFAMILY Chaperone J-domain 44 120 IPR036869 -
Aev01g0187 152 ProSiteProfiles dnaJ domain profile. 49 120 IPR001623 -
Aev01g0187 152 Gene3D DnaJ domain 35 138 IPR036869 -
Aev01g0187 152 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
Aev01g0187 152 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 15 152 - -
Aev01g0187 152 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 15 152 - -
Aev01g0187 152 PRINTS DnaJ domain signature 69 84 IPR001623 -
Aev01g0187 152 PRINTS DnaJ domain signature 92 112 IPR001623 -
Aev01g0187 152 PRINTS DnaJ domain signature 51 69 IPR001623 -
Aev01g0187 152 PRINTS DnaJ domain signature 112 131 IPR001623 -
Aev01g0187 152 Pfam DnaJ domain 50 117 IPR001623 -
Aev01g0187 152 SMART dnaj_3 48 112 IPR001623 -
Aev01g0187 152 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0187 Aev-Chr1 1467577 1468035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0187 51 117 C2H2 Transcription Factor Family AT1G74250 44.776 1.19e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0187 - - gmx:100800959 143.665