Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0182 ATGGCGGCGCTGTTGAGAAAGCTCTGCGTATGCGAAACGGCGTCGTCTTGGAACAGGAAGCACCACCACCACCGATCCTCTTCCTCTTCCTCTTCTGCGACCTCATCATCCGAACCTGTTTCTTCGGTTCGGCATGGCTTGGGATTATTCGACCCTCTTCCTTCGGACATAATAATGCAAATAGTGGGCTTATTGGACCCTAAACAGGCCGCGAAGCTTGGCCTGGTCTCGAAGTCATGGCGATCCATTGTGTCCGATGATGGGCTTTGGGCCCACTTCCTTAAAGCCCACCATCCTCAACCATGGGACTCGATCTTCTTCGCTGAGACCAATTTGGCCACCGCATACCCTCTTCCTCTTCCTCCCACCTCAGTTCCTCAGCCAAGTGTATCATTCAAGCAAGTTTATGCCCAAAGATCACAACTTCCTTGTTCTGTTATCATTGATGGTGGTTCCGGCTATTGCAAATATGGTTGGAGCGAGTACTCGTGTCCCTCGTGGCGATCTGTGACCTTTATGGAATTTGGTAATGTTGAAACGCCGATATATACTAGACTCAGACATTTTTTCGCGACAATCTATAGCAGGATGCAGGCAAAACCAAGTTCTCAACCAGTTGTTGTTTCTATACCAATATGCCACTATGATGATACTGAATCAGCCAAAGCATCAAGGCGGCAGCTTAAAGAAGCAATTCATACTGCACTCTTTGACATGAATGTTCCTGCTGTTTGTGCCCTAAATCAGGCAACTCTAGCTCTGTATGCTGCAAAGCAAACTTCTGGAATAGTTGTCAATATAGGCTTTCAAGTCACATCTGTAGTTCCAATTTTAAATGGTAAAGTGATGCGTAAGGTCGGCGTGGAGGTTGTGGGGCTGGGAGCACTAAAACTCACAGGATTTCTTAGAGAGCAAATGCAACAGAACAACATGAGCTTTGAATCTATGTACACTGTTCGCACACTGAAAGAGAAGCTATGTTATGTTGCTATTGACTATGAAGAGGAGCTATCAAAAGATACACGAGCATCATTTGAAGCAGTAGGAGAAGGATGGTTTACACTTTCAAAAGAGCGCTTTCGAACCGGAGAGATCTTATTCCAGCCTCGTCTTGCCGGGGTGCGAACAATGGGTTTGCACCAGGCAATAGCTCTGTGCATGGACCATTGTGACTCTGCAGAATTAACAGGAGACAGTAACTGGTTTAAGACTGTAGTCTTATGTGGGGGTAGTGCATGTTTGCCAGGTTTGGCAGAACGGTTAGAGAAGGAGCTCCATGCCTCGCTTCCTCCTGAAATTTCCGACGGGATTAAAGTCATACCTCCTCCATATGGTTCAGATACTGCATGGTTTGGAGCGAAGATGATTGGCAATTTGAGCACTTTTCCTGGTCCCTGGTGTACAACAAAGAAGCAATTCCGTCAGAAGTGTAAAGCAAACCGGATTCGGTGA 1452 0.4656 MAALLRKLCVCETASSWNRKHHHHRSSSSSSSATSSSEPVSSVRHGLGLFDPLPSDIIMQIVGLLDPKQAAKLGLVSKSWRSIVSDDGLWAHFLKAHHPQPWDSIFFAETNLATAYPLPLPPTSVPQPSVSFKQVYAQRSQLPCSVIIDGGSGYCKYGWSEYSCPSWRSVTFMEFGNVETPIYTRLRHFFATIYSRMQAKPSSQPVVVSIPICHYDDTESAKASRRQLKEAIHTALFDMNVPAVCALNQATLALYAAKQTSGIVVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQQNNMSFESMYTVRTLKEKLCYVAIDYEEELSKDTRASFEAVGEGWFTLSKERFRTGEILFQPRLAGVRTMGLHQAIALCMDHCDSAELTGDSNWFKTVVLCGGSACLPGLAERLEKELHASLPPEISDGIKVIPPPYGSDTAWFGAKMIGNLSTFPGPWCTTKKQFRQKCKANRIR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0182 483 Pfam F-box-like 53 92 IPR001810 GO:0005515
Aev01g0182 483 PANTHER ACTIN-RELATED PROTEIN 8 104 479 - -
Aev01g0182 483 Gene3D - 250 448 - -
Aev01g0182 483 Gene3D - 43 117 - -
Aev01g0182 483 MobiDBLite consensus disorder prediction 21 40 - -
Aev01g0182 483 SUPERFAMILY Actin-like ATPase domain 146 265 IPR043129 -
Aev01g0182 483 SMART actin_3 143 473 IPR004000 -
Aev01g0182 483 Gene3D - 147 474 - -
Aev01g0182 483 Pfam Actin 193 469 IPR004000 -
Aev01g0182 483 PANTHER ACTIN 104 479 IPR004000 -
Aev01g0182 483 SUPERFAMILY F-box domain 47 140 IPR036047 GO:0005515
Aev01g0182 483 Gene3D Actin; Chain A, domain 4 293 376 - -
Aev01g0182 483 SMART fbox_2 53 93 IPR001810 GO:0005515
Aev01g0182 483 SUPERFAMILY Actin-like ATPase domain 260 470 IPR043129 -
Aev01g0182 483 CDD NBD_sugar-kinase_HSP70_actin 146 290 - -
Aev01g0182 483 ProSiteProfiles F-box domain profile. 47 93 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0182 Aev-Chr1 1436565 1442050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0182 192 467 Cytoskeleton Gene Families AT3G12110 31.228 9.68e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0182 K16616 - gmx:100804254 683.715