Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0181 ATGTTTTTTGAGGATTCCATTCAAAAGGAGAGAGGCCAAAACAAAGGTCATGGGAGTTATTGGTTGTTGGTTGGTTCAATGGTGGATATAACTCTATCTGTTTGTGCATTATATTACAGGAGAGAGCAAGAAATGGATCCTGGTCGCTATGGTCTTCATCAAGGCTGGGATAATAACAGCGCTCTTGAGGGTTATGGTGCGGTCCATGAGCCAAATTATCGGGTTGGTGGTGCTTATGATGATAGACGTTTTGTCGATGAAAGATATCCTAGGGATGCTATATACCAGAGAAATGCTTTCCATCGTGACGTTTTGGATAGGGAGGGCTATCTGCCACCGGGACCTGCTGTTGGCCACTGGAATCAATCCAAAAGGAGAGGCTATGATGAAGATTATCCACTAGACAGGGAATCTAGACGTTTTCAGAGGCCTTATCATGAGCCATATAATCAGATTGATGCCTTCAGGGAACGTGATCTTGACACGTACCCTGAATACGATAAGTTTCGGGATGGTTGTGGCAGCATTGAAAACTACAGTGATCGAGGATATGATAAACCTGCCAGGTTTGGAGGACATGATCGTGATGATTATGCATATGATGATTATGGCTACAAGTCCCGCGTTTCTCATTATCGTAGGGAGGATAGCCATGAGAAGGATTATGATCATGGCCGGCATAGTTATGATTCTGATTATGAAAGAGGTAGTAGAAGAGATAGTAATTGGAGGCGGCGTGAATCCCGTGATCGTGAGCGTGATAAAAGAGGCCTTAGTCGGGAAAGAGATCTCAGCCCACATAGGAAGCATGAGCGTTCTCGTTCCAGATCCCGGTCCCAGTCTCGATCTCGATCTCGGTCCCGGTCCAAATCCCAGTCCCATTCCCATTCTAGATCCCGCTCCCATTCTCGTGGATATGACGATCATCCAAGATCAAGGTCCCCTCGAGGACGAAGCCATAGTCGAAGTTATCGTGAAGACAACTATGGTGACAGTCGGTATGATAGAAGTGAAAGACGTAGAGATCGCGATGAAAGACGTCAGCGTGAGCATTATTCTGTGTCCCCATCTGCAACTATTGTTGTGAAAGGTCTTTCCCAGAAGACAACTGAAGAAGACTTGTACCAAATCCTTGCAGAATGGGGGCCCCTTCGTCATGTTCGCGTTATAAAGGAGAGAAGTTCTGGCATCTCTCGGGGATTTGCATTTATTGATTTTCCTTCTGTGGGAGCTGCACAAGGAATGATGGACAAACTAGGAGATGATGGTCTTGTTGTGGATGGCAGAAAGCTTTTCTTTGAATATAGTAGTAAGCCAACTGGAGGTCCAGGTCCAGATGGAGCTATGAAATCTAGCCATAATCATAAGAGCATCACAATACCATCTGACTGGATGTGCACCATATGTGGCTACATCAATTTTGCTCGCCGGACATCCTGCTATCAGTGTAACGAGCCACGAACGGAGGATGCTCCTGCAGCAGACATTTCATTGTCAAACTCAACAGCCTTAGGAAAGAGAGGTTTGGAGGCAGGTCCAACTCATGTTCTAGTTGTTCGTGGATTGGATGAAAATGCTGACGAGGACATGCTCCGCTATGAATTTTCCAAACATGCTCCAATTAAGGATCTGCGCCTTGTGAGAGACAAGTTTACTCATGTCTCAAGGGGATTTGCATTTGTACACTTTTATTCGGTGGAGGATGCTACCAAAGCTCTTGAGGCAACAAATGGAACAACGCTTGAGAAAAATGGGCAGATTCTAAGGGTAGCATATGCAAAGAGTATCCTGGGCCCGGGATCAGGAACAGCAGGAACTTCCCAATCAAGCAGTCTTGCAGCAGCTGCTATTGAGGCTGCAACATTTTCCCAACAGTATGATTCTGCAGGATGGGCTCCAAAAGAATACAATCCAGATGACAAGCAATCTACTGCTCCAGAGCAAACTGGCAAAGAAATTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCGGGTTATTATTACGATGCCGCTTCTGGGTTTTACTATGATGGGAATACTGGTCTTTACTATGATGGTAATAATGGGATTTGGTATTCATATGACAACCAGACTCAGCAATACATCCCTTGCACTGATCAAAATCAGAATAATACAGCCAGTAACCAGTCCGAACCTACCAAGGCATCTGATGCTTCCAGCAGTAAAAAAGTGATAATTTCTGCCCCGGCTACTGCTGTTACTTCTGTTGAGAAGCCTGCATCATTGGCAGATGCAGTTCAGGCTGCTGCAGCAGCTGCTTTAGCTGCTGAGAAGAAAGAGAAGGAAAGATCGAAGGAGATAAAGCTTGCCTCCAAAAGCAGTATTCTGGCTAACAAGAAAAAAATGAACAATGTGTTGTCAATGTGGAAGCAGAGGAGTCATGAGGGTCAGGCCACTCGAGTGGCCCTAGAGGACAATCAGCTCTCCGCATCTGCTGATGATAGGTCATATTCTTCTGCAAACTCTGCCAAGAATAAGATGAAAACTGAGGCTACAACTAGGGAAAGCAATGCATCTAGTCTGGGAACTCACCCGACTGTTACCCCGGCTGCAGCATTGGATTCTCAGACGCAGCCACGCCCTTTTAGTAATAGCTTTGGTGGAACTGTGATGGGAGTTATAAGGGGCTCAGGAAGAGGGGTTGTTAAATCAGATACTTCTTATTCTGGTTCTACTACCTCTGCATCACCCATTTCAAGTTTATCGTCAGCAAATGATGCACAAACAACTTCTACTCCCTTTAGAACAGATGTCTCTGCACTTAGTTCATACACGCCATCTGCAGCTGTTGGAAGTGGCAGGAGAAGGTTTTCAGAAATGCCTTCAACTCAGAAGGATCAACCTCAAACAACCTACAGGGATCGTGCGGCTGAGAGGAGAAGTTTGTACGGTTCATCATCCTCGGCTGGGAATGATTTGGCTGACCTTGAAATTGGGGATTCAAATCGGGATTTTGCATCAAGGAGGGGCGACACAATGCCTTTCCCTCCTGGGGTTGGTGGAGGACGTGTGGTTGGAGAAGTCAATGTAGATACTTTTGAGGTGATTACAGCAGACAAAGCAATTGATGAAAACAATGTCGGCAATCGGATGCTTCGCAACATGGGATGGCAGGAAGGCTTGGGACTAGGAAAAGATGGAAGTGGAATGGTAGAGCCAGTTCAGGCACAAGCCATGGAAAATAGGGCAGGACTTGGGAGTCAGCAGAAGAAGTTGCTAGATCCTAGCCTTGAGGTACAGGCCGGCGACAGTTACAAGATGCTTATTCATAAGAAAGCTCTTGCCAGGTTTCGCGAAATGTCAGAGAGTTAG 3339 0.4594 MFFEDSIQKERGQNKGHGSYWLLVGSMVDITLSVCALYYRREQEMDPGRYGLHQGWDNNSALEGYGAVHEPNYRVGGAYDDRRFVDERYPRDAIYQRNAFHRDVLDREGYLPPGPAVGHWNQSKRRGYDEDYPLDRESRRFQRPYHEPYNQIDAFRERDLDTYPEYDKFRDGCGSIENYSDRGYDKPARFGGHDRDDYAYDDYGYKSRVSHYRREDSHEKDYDHGRHSYDSDYERGSRRDSNWRRRESRDRERDKRGLSRERDLSPHRKHERSRSRSRSQSRSRSRSRSKSQSHSHSRSRSHSRGYDDHPRSRSPRGRSHSRSYREDNYGDSRYDRSERRRDRDERRQREHYSVSPSATIVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERSSGISRGFAFIDFPSVGAAQGMMDKLGDDGLVVDGRKLFFEYSSKPTGGPGPDGAMKSSHNHKSITIPSDWMCTICGYINFARRTSCYQCNEPRTEDAPAADISLSNSTALGKRGLEAGPTHVLVVRGLDENADEDMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRVAYAKSILGPGSGTAGTSQSSSLAAAAIEAATFSQQYDSAGWAPKEYNPDDKQSTAPEQTGKEIGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDNQTQQYIPCTDQNQNNTASNQSEPTKASDASSSKKVIISAPATAVTSVEKPASLADAVQAAAAAALAAEKKEKERSKEIKLASKSSILANKKKMNNVLSMWKQRSHEGQATRVALEDNQLSASADDRSYSSANSAKNKMKTEATTRESNASSLGTHPTVTPAAALDSQTQPRPFSNSFGGTVMGVIRGSGRGVVKSDTSYSGSTTSASPISSLSSANDAQTTSTPFRTDVSALSSYTPSAAVGSGRRRFSEMPSTQKDQPQTTYRDRAAERRSLYGSSSSAGNDLADLEIGDSNRDFASRRGDTMPFPPGVGGGRVVGEVNVDTFEVITADKAIDENNVGNRMLRNMGWQEGLGLGKDGSGMVEPVQAQAMENRAGLGSQQKKLLDPSLEVQAGDSYKMLIHKKALARFREMSES* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0181 1112 SUPERFAMILY RNA-binding domain, RBD 344 442 IPR035979 GO:0003676
Aev01g0181 1112 ProSiteProfiles Zinc finger RanBP2 type profile. 460 489 IPR001876 -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 213 270 - -
Aev01g0181 1112 PANTHER RNA-BINDING PROTEIN 82 256 - -
Aev01g0181 1112 PANTHER RNA-BINDING PROTEIN 266 1109 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 182 200 - -
Aev01g0181 1112 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 515 595 IPR000504 GO:0003723
Aev01g0181 1112 Pfam G-patch domain 1034 1075 IPR000467 GO:0003676
Aev01g0181 1112 SUPERFAMILY RNA-binding domain, RBD 513 598 IPR035979 GO:0003676
Aev01g0181 1112 PANTHER FI21118P1 82 256 - -
Aev01g0181 1112 PANTHER FI21118P1 266 1109 - -
Aev01g0181 1112 SMART rrm1_1 516 591 IPR000504 GO:0003723
Aev01g0181 1112 SMART rrm1_1 359 434 IPR000504 GO:0003723
Aev01g0181 1112 MobiDBLite consensus disorder prediction 213 355 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 812 874 - -
Aev01g0181 1112 Pfam OCRE domain 657 705 IPR041591 -
Aev01g0181 1112 ProSitePatterns Zinc finger RanBP2-type signature. 464 483 IPR001876 -
Aev01g0181 1112 Gene3D - 458 490 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 300 352 - -
Aev01g0181 1112 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 360 419 IPR000504 GO:0003723
Aev01g0181 1112 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 517 583 IPR000504 GO:0003723
Aev01g0181 1112 Gene3D - 323 457 IPR012677 -
Aev01g0181 1112 Gene3D - 501 631 IPR012677 -
Aev01g0181 1112 CDD RRM1_RRM2_RBM5_like 513 593 - -
Aev01g0181 1112 ProSiteProfiles G-patch domain profile. 1033 1079 IPR000467 GO:0003676
Aev01g0181 1112 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 358 438 IPR000504 GO:0003723
Aev01g0181 1112 SMART zf_4 462 486 IPR001876 -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 271 299 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 171 200 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 706 730 - -
Aev01g0181 1112 CDD OCRE_SUA_like 654 706 IPR035623 -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 812 985 - -
Aev01g0181 1112 MobiDBLite consensus disorder prediction 630 656 - -
Aev01g0181 1112 SMART G-patch_5 1031 1077 IPR000467 GO:0003676
Aev01g0181 1112 MobiDBLite consensus disorder prediction 891 938 - -
Aev01g0181 1112 SUPERFAMILY Ran binding protein zinc finger-like 455 490 IPR036443 -
Aev01g0181 1112 CDD RRM1_RRM2_RBM5_like 356 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0181 Aev-Chr1 1428038 1434053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0181 357 579 Eukaryotic Initiation Factors Gene Family AT2G36660 26.000 1.08e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0181 K13094 - gmx:100777686 1622.06