Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0123 ATGGCTGGTTCTGCTGATAACAAGAATTCCAACTCAATTGTGCCCAGAATTCTCCAAGGAGGATTGGATGGAACAAGAAAACTAGGACATAATAGAAGAGCTTTGAGTGTTATCAATCAGAATCTGCAGGCTCGACCCTACCCTGTTGTTAACAAGAGGCCTTTGTCTGACAAACATGAAATCTGTGAAAAGAAGCAGGTGGATCCAGTGCACAGGCCCATCACAAGGAGATTTGCTGCACAAATGGCTATCATCCAGCAATCCTTTGTTGAGGGATCTAGCAAATCAGTCTCCTCAATTCCAAACTCGAATAATGGATTTGGAGAGGCTATAGCCATTGATGAGGAACACAAGTCACCAGCACCAGGGGACCAACCGGTCCCGATGTCGTTGGAGCAACCAGAACCAATGCAGATGGAGGAAGTTGAGATGGAGGATATAGTTGAAGAGCCTATTTTCAACATTGATAGCTGTGATCTCAAAAATCAACTTGCAGTAGCAGAGTACATTGAAGATATTCATTTGTTCTACAGGAAAATTGAGTGTGTTGGCTGTGTTTCACCGGATTATATGGCGCAACAAGCTGACATTAATGAAAGAATGAGGGCTATACTCGTCGACTGGCTTATCGAGGTGCATGACAAGTTCGACCTCATGCAGGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTTTTGGCCAAGCAAACTGTTGTGAGGAAGAAGCTTCAGTTGGTTGGCCTGGTTGCTATGCTTCTGGCTTGCAAGTATGAGGAAGTTTCTGTGCCTGTGGTTGGCGATTTGATCATCATATCCGACCGCGCATACTCTAGGAATGAAGTTTTGGAAATGGAGAGGATGATGCTCAATACACTGCAGTTTAACATGTCTGTTCCAACTGTTTATGTTTTTATGAAAAGGTTCCTGAAGGCAGCTCAGGCTGACAAAAAGCTTGAGATTCTGGCTTTCTTCTTTGTGGAGCTGTCTCTGGTGGAGTACAAGATGGTGCAGTTCCCTCCATCTATGCTAGCTGCAGCTGCAGTCTACACTGCTCAATGCACTGTCAGTGGTTTCAAACACTGGAGTAAGACATGTGAATGGCATGCGAATTACTCGGAAGATCAGCTACTGGTATGCTCTAGCATGATGGTTGAACTTCACCTGAAGGCTGGGACAGGAAAACTCAAAGGGGTGCATAGGAAGTACAGTTCAATCAAGTTTAGCTTTGCTGCGAAATGCGAACCGGCTTGTTTTCTTCTGGAGAACCAACTGTTGTTGCAGGGGCATGTATAA 1296 0.4437 MAGSADNKNSNSIVPRILQGGLDGTRKLGHNRRALSVINQNLQARPYPVVNKRPLSDKHEICEKKQVDPVHRPITRRFAAQMAIIQQSFVEGSSKSVSSIPNSNNGFGEAIAIDEEHKSPAPGDQPVPMSLEQPEPMQMEEVEMEDIVEEPIFNIDSCDLKNQLAVAEYIEDIHLFYRKIECVGCVSPDYMAQQADINERMRAILVDWLIEVHDKFDLMQETLFLTINLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLIIISDRAYSRNEVLEMERMMLNTLQFNMSVPTVYVFMKRFLKAAQADKKLEILAFFFVELSLVEYKMVQFPPSMLAAAAVYTAQCTVSGFKHWSKTCEWHANYSEDQLLVCSSMMVELHLKAGTGKLKGVHRKYSSIKFSFAAKCEPACFLLENQLLLQGHV* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0123 431 ProSitePatterns Cyclins signature. 202 233 IPR006671 -
Aev01g0123 431 SUPERFAMILY Cyclin-like 161 297 IPR036915 -
Aev01g0123 431 PIRSF Cyclin_A_B_D_E 7 428 IPR039361 -
Aev01g0123 431 Pfam Cyclin, C-terminal domain 300 416 IPR004367 -
Aev01g0123 431 Pfam Cyclin, N-terminal domain 172 298 IPR006671 -
Aev01g0123 431 SUPERFAMILY Cyclin-like 299 416 IPR036915 -
Aev01g0123 431 Gene3D - 172 412 - -
Aev01g0123 431 PANTHER CYCLIN-B2-1 21 420 - -
Aev01g0123 431 Gene3D - 186 298 - -
Aev01g0123 431 CDD CYCLIN 201 290 IPR013763 -
Aev01g0123 431 SMART cyclin_7 207 291 IPR013763 -
Aev01g0123 431 SMART cyclin_7 304 386 IPR013763 -
Aev01g0123 431 SMART Cyclin_C_2 300 417 IPR004367 -
Aev01g0123 431 PANTHER CYCLINS 21 420 IPR039361 -
Aev01g0123 431 CDD CYCLIN 298 385 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0123 Aev-Chr1 1019351 1022388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0123 18 421 Core Cell Cycle Gene Families AT1G20610 57.757 2.19e-166 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0123 K21777 - gmx:100798068 583.563