Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0122 ATGGGAGGTGACGGTGCTGCTGAGGGTTCGACGGAGTCGAAGGTCGCCGAAGGTGTCAGCATCAACATTCGGTGCTCCAATGGTTCTAAGTTCTCGGTTCCGATTCCCCTTGATTCCACCGTCGCAACCTTCAAGGATGTTGTCGCTCGTAGCTGCGACATCCCCGCGGAACAGCAGCGCCTGATTTACAAGGGTCGGGTCCTGAAGGACGATCAAACCCTGCAAAGCTACGGTTTGGACGCAGATCACACTGTCCATTTGGTTCGTGGTTTTGCACCTGCAAATCCAACTGGTGGGACCAATGCTAGTGGCACCAACACTGCACCAAGTAATGCAAGAGGTACTGGTGCTAATGAAGATGCTGGGGGTGTAGGAGTGCTTGGTCTTGGAAGTTCACTGTTCCCTGGATTAGGTATTGGTGGGATTGGTGGCAATGGCTTATTCGGAGAGGGACTTCCGGATCTTGAGCAGATGCAGCAGCCATTTCTCTCAAATCCAAACTTAGTGAGAGAAATAATGAACACACCTGCTATGCAGAACCTAATAAATAATCCTGAGATTGTGCGGAATCTTATAATGAGTAACCCACAGATGCAGGAGCTCATTGATCGGAACCCTGAGCTAGCACACATACTTAATGATCCTAGCACCCTCCGCCAGACACTTGAAGCTACAAGGAACCCTGAGATCATGCGTGAAATGATGAGAAATACAGACAGGGCAATGAGCAACATTGAATCATCTCCTGAGGGATTTAACATGCTGAGGCGCATGTATGAAAATGTTCAAGAACCATTTCTAAATGCTACAACAATGGCTGGTAATGCAGGAAACAATAATACACCAGTTTCTGGGACTCAAGCTAGGGACCGAACTAATCCCTCACTGACTAGTTCTGATGCTGGTTCTCAATTACCCAACACTAACCCACTTCCTAATCCATGGTCCTCTACTGGAACTGGCGGTGCCCAAAATAACAGCAGAAGGTCAACCACTGGTGGGGATGCTAGGCAGCAGGCACCTACTGGTTTAGCAGGGCTTGGTCTTCCTGATCTACAAGGCATGCTGGGCAGCAATGCTATGCCAGATCCTGCTTCATTGACCCAGTTAATGCAAAACCCAGCTATCTCACAAATGATGCAAAGCATGCTTTCCAACCCACAGACTATGAATCAGCTTCTTGGGGTTAATTCTGAGCAACGCGGCTTGCCTGATTTGAATTCTCTTAGAGAAGTGATGCAAAACCCAGAGTTCCTCCGCTTGTTTTCTTCGCCTGAGACACTGCAGCAACTCTTGTCTTTCCAACAAGCTTTTCTGTCTCAGATTGGTCAGCAACAATCATCTCGGGAATCAGGTCAAACTGGTGGAGGCACTGGACCAATGAACAACTTTGGGTTGGAGATGTTATCAAGCATGTTTGGTGGACTTGGAGCTGGTAGCCTAGCTGTTCCAAATAGATCAAATGAGCCACCGGAGCAATTGTATGCGGCGCAGCTTTCGCAGCTACAAGAGATGGGATTCTTTGACACACAAGAGAACATAAGGGCTCTTATTGCTACAGCAGGGAATGTCCATGCTGCCGTCGAACGGCTTCTGGGGAACTCTGGTCAGTAG 1614 0.4851 MGGDGAAEGSTESKVAEGVSINIRCSNGSKFSVPIPLDSTVATFKDVVARSCDIPAEQQRLIYKGRVLKDDQTLQSYGLDADHTVHLVRGFAPANPTGGTNASGTNTAPSNARGTGANEDAGGVGVLGLGSSLFPGLGIGGIGGNGLFGEGLPDLEQMQQPFLSNPNLVREIMNTPAMQNLINNPEIVRNLIMSNPQMQELIDRNPELAHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNAGNNNTPVSGTQARDRTNPSLTSSDAGSQLPNTNPLPNPWSSTGTGGAQNNSRRSTTGGDARQQAPTGLAGLGLPDLQGMLGSNAMPDPASLTQLMQNPAISQMMQSMLSNPQTMNQLLGVNSEQRGLPDLNSLREVMQNPEFLRLFSSPETLQQLLSFQQAFLSQIGQQQSSRESGQTGGGTGPMNNFGLEMLSSMFGGLGAGSLAVPNRSNEPPEQLYAAQLSQLQEMGFFDTQENIRALIATAGNVHAAVERLLGNSGQ* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0122 537 MobiDBLite consensus disorder prediction 90 117 - -
Aev01g0122 537 Gene3D - 477 537 - -
Aev01g0122 537 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 489 534 IPR015940 -
Aev01g0122 537 MobiDBLite consensus disorder prediction 270 338 - -
Aev01g0122 537 PANTHER UBIQUILIN 6 537 - -
Aev01g0122 537 ProSiteProfiles Ubiquitin domain profile. 19 88 IPR000626 GO:0005515
Aev01g0122 537 SMART CBM 195 234 IPR006636 -
Aev01g0122 537 SMART CBM 396 431 IPR006636 -
Aev01g0122 537 SMART CBM 145 182 IPR006636 -
Aev01g0122 537 SMART CBM 349 393 IPR006636 -
Aev01g0122 537 MobiDBLite consensus disorder prediction 270 350 - -
Aev01g0122 537 Pfam UBA/TS-N domain 495 531 IPR015940 -
Aev01g0122 537 SUPERFAMILY UBA-like 491 533 IPR009060 GO:0005515
Aev01g0122 537 Pfam Ubiquitin family 21 88 IPR000626 GO:0005515
Aev01g0122 537 MobiDBLite consensus disorder prediction 443 460 - -
Aev01g0122 537 CDD Ubl_Dsk2p_like 19 91 - -
Aev01g0122 537 SUPERFAMILY Ubiquitin-like 13 105 IPR029071 -
Aev01g0122 537 SMART ubq_7 19 90 IPR000626 GO:0005515
Aev01g0122 537 Gene3D - 8 103 - -
Aev01g0122 537 PANTHER UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2A-RELATED 6 537 - -
Aev01g0122 537 MobiDBLite consensus disorder prediction 443 464 - -
Aev01g0122 537 Gene3D - 190 248 - -
Aev01g0122 537 CDD UBA_PLICs 495 533 - -
Aev01g0122 537 MobiDBLite consensus disorder prediction 96 114 - -
Aev01g0122 537 SMART uba_6 495 533 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0122 Aev-Chr1 994896 999171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0122 19 88 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 30.000 4.79e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0122 K04523 - gmx:100776447 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0347 05 2479377 2485896 Aev01g0122 01 994896 999171 PCT