Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0116 ATGAAGAACAAGTTGTTGACTACACTCTTAGTCTTCAGGAACGCCATTAGCGAAGAGGTAATTAGGAGTGTGCATTTGTATCAAGCAAAGGATGGGAAGGTAAATGAAGTTGAAAGAGAGTTTATGTTTTCAGAGAATGATCCCTATGGGGAAATGGTGGAGGTCAACCCAATTCTCACATTGGAGAAGAAGTTCTGTGTTTCTAAAGTTTCTGAAGGTTATCAGGATGGAGTGTGGCTTTGTATCTTTTCCTTTCACAGAGATCGCAAGCCTCAATTTTCCGGCATTCCACCCTTGTTTTTGGAATCTAGGAACCCGAAGCTTCGGATGATTCCAACCTTGCTTAAAGATCTCCGCATGATATACAAATCGGGAAAGGACAAAGATATTCCATCAGACTCTCCAAAGGAAGAAGGCCAAGAAAACAGCACAGATCGCCAACCATCAAGAAAAGTTCCTGTGTTTCGACAGGATCTGAACTGTCTTCCTTATGAAGATGAAATTTCTGAGTTGCCAGACAATAATCCAGATGATGAAACCGTGTCAGGTTCTGCAGAGAAGAAAAAGAGGGCAGCCAGTATCCAGGTAGCAAAACTTACGCTACCAGATTTGACCAAGTGTTTTGACATGACGATCGCCGAAGCTTCAAAGAAACTAAATGTTGGACTGACGGTTCTCAAGAGGAAATGCAGAGAATTTGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTGGACGTTCTCATTCAAAATCTTCAGGAAGAAGCAAAAAACCAGAGCTCCGAGGACATGGCCGCTGCCGCCATGGAGAAGCAAAAGATGTTGGAGAGTGAAAAGGAAAATATAGAGAGGAGACCCTTCATGGACATAAGGCATGAGACCAAGCGATTGAGGCAGGATGTCTTCAAGAGAAGGCATAAAGCTAGAGCTCTTGCTAAACATAATCCTACCGTCTCGGGCGACGAAACGACGTCTCGTGAGTCGTAG 990 0.4384 MKNKLLTTLLVFRNAISEEVIRSVHLYQAKDGKVNEVEREFMFSENDPYGEMVEVNPILTLEKKFCVSKVSEGYQDGVWLCIFSFHRDRKPQFSGIPPLFLESRNPKLRMIPTLLKDLRMIYKSGKDKDIPSDSPKEEGQENSTDRQPSRKVPVFRQDLNCLPYEDEISELPDNNPDDETVSGSAEKKKRAASIQVAKLTLPDLTKCFDMTIAEASKKLNVGLTVLKRKCREFGIPRWPHRKIKSLDVLIQNLQEEAKNQSSEDMAAAAMEKQKMLESEKENIERRPFMDIRHETKRLRQDVFKRRHKARALAKHNPTVSGDETTSRES* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0116 329 MobiDBLite consensus disorder prediction 307 329 - -
Aev01g0116 329 Coils Coil 266 286 - -
Aev01g0116 329 MobiDBLite consensus disorder prediction 125 145 - -
Aev01g0116 329 MobiDBLite consensus disorder prediction 125 150 - -
Aev01g0116 329 ProSiteProfiles RWP-RK domain profile. 181 266 IPR003035 -
Aev01g0116 329 PANTHER PROTEIN RKD4 11 315 IPR044607 GO:0003700
Aev01g0116 329 Coils Coil 243 263 - -
Aev01g0116 329 PANTHER PROTEIN RKD5 11 315 - -
Aev01g0116 329 Pfam RWP-RK domain 199 246 IPR003035 -
Aev01g0116 329 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0116 Aev-Chr1 947373 950761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0116 16 325 AtRKD Transcription Factor Family AT4G35590 43.161 1.42e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev01g0116 RWP-RK 2.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0116 - - adu:107475952 441.81