Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0108 ATGATGAGCAAAGTTTGGTTCCTTGTTCTTGTGATCTTGTACCATGGAATTATTATTCCTTCAAAAGGGTTAAGCAGCAATAATGACTCAACAAAAGCACCAAATACAGTTAACATAGGAGCAATCTTATCTTTCAATTCAACCATTGGAAGGGTGGCAAAAATTGCCATAGAAGCAGCAGTGAATGATGTTAATTCTGATGAAACAGTTCTGAATGGAACCAAGCTTAATATCTCAATGCAGGACACAAAACTCTCCACTGGATTCCTTGGAATCATTGACTCATTACTATTGATGGAGAAAGACACTGTGGCAATAATAGGCCCCCAATACTCAGTTATGGCTCATGTGATCTCACACATTGCAAATGAGATGCAAGTACCTCTCCTATCATTTGCAGCAACAGACCCTACACTAACATCTCTCCAATTCCCATACTTTGTCAGAACAACTCAGAGTGATCTGTTCCAAATGTCTGCTGTAGCAGACATCATAGACTACTTCCAATGGAGAGATGTCATAGCAATTTACATTGATGATGACCATGGCCGAAATGGGGTTGCTTCTTTAGGTGATAAGCTAGCTGAAAAACGAGCCAAAATCTCTTACAAAGCCCCCCTTAGGCCAGATAATGCCATTAACAAGGAGGAGATTAATAGTGTTCTGTTTAAGGTAGCTTTGATGGAATCTAGAGTTATAGTTCTTCACATTTACCCAAATTTTGGCCTAGAAGTTCTTCATGCTGCTCAATCCCTTGGCATGATGGGAAGTGGCTATGTCTGGATTGTCACTGATTGGCTCACAACATTGCTAGATTCTGATCCATCACTCTCCACAACTTCTGCCATGAATGACATGCAAGGTGTCATCACTTTGAGAATGTACACTCCAGAGTCCCAAATCAAGAGAAACTTTGTGTCTAGATGGAGCAAAGATATTGGTTTGAACATATTTGGTTTATATGCTTATGACACTATTTGGGTCATAGCTTCAGCACTTGATGCATTTTTCAAAAGTGGGGGTGCTCTGTCTTTCTCAAATTACTCAAAAAATTTGGACTTTTTAAGATCAATGGGCATGTTTGATAATGGTAATATTTTGTTGCAAAAGATTTTAGAGGTTAATAGAACTGGCTTAACAGGGGAAATGGTGTTTGATTCTGATGGAAACTTGCTGAATCCATCTTATGAAGTGATTAATGTGATTGGTAGTGGAATTAGGAGGATTGGGTTTTGGTCTAACTCTTCTGGCCTTCACACTGACGAGTATAAATTATTAGCACGAAGTGGCCCACAAGACGCTAGTAATAATAATGATAATTCAAAATTGTATGGTGTGATATGGCCTGGGCAGACTACGGAGACGCCACGTGGATGGGTGTTTGCGAGCAATGGGAAGCATTTGAGGATTGGGGTGCCACTTAGGATTAGTTATGGAGAGTTTGTGTCGAGGGCCGAGGGAACAGAGAAATTTGGTGGGTATTGCATTGAAGTGTTTCTTGCTGCATTGGAATTGTTGCCTTATCCTGTTTCATACAAGTTCGTCTCATTTGGTGATGGAAGAACCAACCCTTTGAATTCTGAACTTCTCAACCAAATCCCACTTGGTGTGTTTGATGTTGTGGTGGGGGACATTACTATTACAACAAACAGAACAAAGATTGTGGATTTTACACAACCATATATTGAGTCAGGGCTAGTTGTTGTGGCTCCTATAAGGAAGTTGAAATCAAGTGCATGGGCCTTCCTAAGACCATTCACTCCAATGATGTGGTTTGTCACAGGAATGAGTTTCTTAGTTATTGGAGTTGTTGTGTGGATTTTAGAACGTCGCTTAAATGATGATTTTAGAGGTCCACCTAGAAGGCAATTTATCACTATTATCTGGTTTAGCTTCTCAACCCTGTTTTTTGCACAGAGAGAGAAAATACTGAGCACCCTTGGTCGATTGGTGGTAATAATATGGCTGTTTGTGGTATTGATACTAAACTCAAGCTACATTGCAAGCCTAACCTCAATTCTAACAGTAGAACAACTCTCATCCCCAATTAAGGGAATTGAGAGCTTAGCAACAAGCAGTGACAGAATTGGCTACTTGAGAGGTTCTTTTGCAGAGAACTATCTGACTCAAGAGCTTAACATACATAGGTCAAGGCTTGTTCCTCTCAACTCACCATTAGAGTTTAAAAGGGCATTGAAGGATGGACAAGGTAATGGTGGGGTTGCTGCCATTATAGATGAACGTGCATATATGGAGTTGTTCCTTTCAACCAGATGTGACTATAGTATTGTTGGTCAAGAGTTCACCAAAATGGGATGGGGCTTTGCATTCCCAAGGGATTCTCCCCTAGCAATTGACATGTCAACTGCAATCTTAAAACTGTCAGAGAATGGTGACCTACAGAGAATTCATGACAAGTGGCTAACAAGAAGTGCTTGCAGCTCAGAAGGTGCAAAACAGGGCATAGACAGGCTTGAGATTAAGAGCTTTTGGGGTCTTTTCCTTCTTATTGGCATTGCATGCTTCATTGCTCTGCTTTGCCATGTTATTAAAATGGCCTACCAATTTAGGAGCCATCCCACCAATTGTAGCAACATTGAAGGCTCAATCTCACACTCTTCTCGCCTTAGATCATTCATTTCCTTTGTCAATGAGAAGGAAGATGAAGAGGAAGATCACAAATATAGGTCCAAAAGAAGGAGAAAGGAAAAAGGGTTTAGCAAAAGGGTAGCTCATGAAGATGTTGGATCATTGGGGCTATAA 2763 0.405 MMSKVWFLVLVILYHGIIIPSKGLSSNNDSTKAPNTVNIGAILSFNSTIGRVAKIAIEAAVNDVNSDETVLNGTKLNISMQDTKLSTGFLGIIDSLLLMEKDTVAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLFQMSAVADIIDYFQWRDVIAIYIDDDHGRNGVASLGDKLAEKRAKISYKAPLRPDNAINKEEINSVLFKVALMESRVIVLHIYPNFGLEVLHAAQSLGMMGSGYVWIVTDWLTTLLDSDPSLSTTSAMNDMQGVITLRMYTPESQIKRNFVSRWSKDIGLNIFGLYAYDTIWVIASALDAFFKSGGALSFSNYSKNLDFLRSMGMFDNGNILLQKILEVNRTGLTGEMVFDSDGNLLNPSYEVINVIGSGIRRIGFWSNSSGLHTDEYKLLARSGPQDASNNNDNSKLYGVIWPGQTTETPRGWVFASNGKHLRIGVPLRISYGEFVSRAEGTEKFGGYCIEVFLAALELLPYPVSYKFVSFGDGRTNPLNSELLNQIPLGVFDVVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKLKSSAWAFLRPFTPMMWFVTGMSFLVIGVVVWILERRLNDDFRGPPRRQFITIIWFSFSTLFFAQREKILSTLGRLVVIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSSDRIGYLRGSFAENYLTQELNIHRSRLVPLNSPLEFKRALKDGQGNGGVAAIIDERAYMELFLSTRCDYSIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLEIKSFWGLFLLIGIACFIALLCHVIKMAYQFRSHPTNCSNIEGSISHSSRLRSFISFVNEKEDEEEDHKYRSKRRRKEKGFSKRVAHEDVGSLGL* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0108 920 CDD GluR_Plant 466 808 - -
Aev01g0108 920 PANTHER GLUTAMATE RECEPTOR 28 896 - -
Aev01g0108 920 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 28 896 - -
Aev01g0108 920 PIRSF IGluLR_plant 2 916 IPR017103 -
Aev01g0108 920 Gene3D - 465 578 - -
Aev01g0108 920 Gene3D - 55 393 - -
Aev01g0108 920 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Aev01g0108 920 Gene3D - 579 717 - -
Aev01g0108 920 Gene3D - 732 815 - -
Aev01g0108 920 Pfam Receptor family ligand binding region 55 403 IPR001828 -
Aev01g0108 920 SUPERFAMILY Periplasmic binding protein-like II 445 810 - -
Aev01g0108 920 SUPERFAMILY Periplasmic binding protein-like I 34 459 IPR028082 -
Aev01g0108 920 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 50 66 - -
Aev01g0108 920 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 111 139 - -
Aev01g0108 920 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 322 334 - -
Aev01g0108 920 CDD PBP1_GABAb_receptor_plant 38 418 IPR044440 -
Aev01g0108 920 Pfam Bacterial extracellular solute-binding proteins, family 3 527 809 IPR001638 -
Aev01g0108 920 Pfam Ligand-gated ion channel 810 841 IPR001320 GO:0015276|GO:0016020
Aev01g0108 920 Gene3D - 153 418 - -
Aev01g0108 920 MobiDBLite consensus disorder prediction 889 920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0108 Aev-Chr1 893242 897801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0108 2 901 Ion Channels AT1G42540 55.917 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0108 K05387 - gmx:100790502 1421.37