Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0101 ATGACTCGAACTCTGAGAATCCTTGAGTCTGCTTCTGTTGACGCTGTGCCGCCAGCAGAAGCAGCCTCTGTGGAGTCTGACTTTGTTGTCATCCTGGCAGCTCTCCTTTGCGCTCTCATATGCGTCGTTGGCCTCATCGCCATGGCCCGCTGTGCCTGGCTCCGCCGTGGCCCCGTCGCTGGTGGAGCCTCGCCACGGCGGCAGGCACTCGCTAATCGCGGTCTCAAGAAGAAGGTCCTCAATTCTCTCCCGAAGTTCACCTATGGTGGCGGCAAAGATAGCTCTGACGACGGTGACAAGAGCAAGTGGGTGGTGTCGTCGGAATGCGCGATTTGCTTGGCCGAGTTTGCCGCCGCCGACGAGGTACGGGTGCTGCCTCAGTGCGGCCACGGATTCCACGTGGCGTGCATTGACACGTGGCTTGGATCACACTCTTCCTGCCCTTCCTGCCGCGCTCTCCTCGTCGTCGCCGTCACAAGGTGCCAGAAGTGCGGCCAGTTCCCGGCAGTTGCAGGCGGCGGCGTCGCTATGGTGGCGGTTGTCGGCGGAACAGAGTCAAAGACTACCGTTGGTGGTGGCAATGTCGGTGCTGCTGCTAATTGTAGTAATAGCAACAATGTTAACTATGACTTCTTGCCTTGA 642 0.5919 MTRTLRILESASVDAVPPAEAASVESDFVVILAALLCALICVVGLIAMARCAWLRRGPVAGGASPRRQALANRGLKKKVLNSLPKFTYGGGKDSSDDGDKSKWVVSSECAICLAEFAAADEVRVLPQCGHGFHVACIDTWLGSHSSCPSCRALLVVAVTRCQKCGQFPAVAGGGVAMVAVVGGTESKTTVGGGNVGAAANCSNSNNVNYDFLP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0101 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 155 IPR013083 -
Aev01g0101 213 SUPERFAMILY RING/U-box 80 157 - -
Aev01g0101 213 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 181 - -
Aev01g0101 213 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Aev01g0101 213 CDD RING-H2_PA-TM-RING 108 151 - -
Aev01g0101 213 SMART ring_2 109 150 IPR001841 -
Aev01g0101 213 Pfam Ring finger domain 108 151 IPR001841 -
Aev01g0101 213 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0101 Aev-Chr1 850296 850937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0101 1 164 C3H Transcription Factor Family AT1G76410 60.355 1.22e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0101 - - gmx:100813341 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0318 05 2311469 2312128 Aev01g0101 01 850296 850937 PCT