LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g0099	ATGGCTGATCCTAATCAGAATGAGGATAACATATTTGGTACAATATATTCTCCTCTAAACTGTGGATTCAACATAAGCTCCCCCACTCCATTTGAGGATGAATTGTATCCAAATTATCAATACTACCAATACTCAGCAGAAGATTATTGCTGCTATGATGATGGATTCATCAATAGCATGCCCTTGTTTCAACACTCTTTTCTTCCAACACCTCCTAACAATCTTGTTAATACCATTCCAAGTGATCCAAATTCAATTCAATCTTCTCAGAACTACAATGGTGGCAAATTGAGTGAGCCAAATCCAATTCAATCTCTTGATGAGGCCACTCCTCCCCCTCCTATAGTCCATCCACCTCCCTCGTCACTACCACCATTACCAAACCATGGTCACGACGAGCCTAAATCATCAATTCAGTTTTTTGAGGACACTCCTCCTGCTATTGTCCACCCACCTCCCTCACCACTACCATCATTACCTAACTGCGGTGATAACCAGCCTAAATCATCAATTCAATTTTTCGAGGACACTCCTCCTCCTGCTATAGTCCATCCACTTCCCTCACCACTACCACTATTACCTAACCGTGGTGATATCGAGCCTAAATCATCAATTCAATTTTTCGAGGACACTCCTCCTCCTACTATTGTCCATCCACCTCCTTCACCACTACCACCATTACCAAGTGGTGATGACGAGCCGAAATCATCAATTCAATTTTTTGAGGACACTCTTCCTCCTACTACTATTACTATTGTCCATCCACCTCACTCACCACTACCACCATTACCAAACTGTGGTGATGACGAGCCGAAATCATCGTCAATTCAATTTTTTGAGGACACTCTTCCTCCTGCTATTGTCCATCAACCTCCCTCACCAAATTCAATTCAATGTTATGAGAATGCCCATTTTGTTCTTGTCCCTCCACCAAGTGAGCCGAATCCGATGAAGATTCCCATGGTTGTGAATGATCAAGCCGCAGCCATTGAAGAAGAAGTTGCCCCAACAACACACAATAATGCAGCATCAGTCTTTGACCCTTTGAGAGAGATCATGTTCATTCCTCCTCCTCCTCCTCTGTTTCCTATATTCATGATTGGTGAATCAAGCCATTGCAATGAACCCATCTTTTTTCCAAATAATTGCAGCAACAATAACTATCATCATTCTGAAATTGATAATAATCCCTTAGCCATGATTGTTGCAAATTCTTCTTCTTCTTATAATCCAATGGTGGCTGCTCCAATTCCTTCTCATACAGAGACAGAGACAAGGACAGAGGAACATGTTGCAGTCAATAATAATATGATGCTGATGAGTAAGAGTAAGGTGGATAATCATAATAAATCATCCAACAAAAGAAAGAAGAATATAATACCTTTGCGTTCTGATTTTGGTGATTATAGTGTTGCTTTCAGACAAGGGGTCCCAATAGTTTCTCAATATGATTTGCTCCAAAAGTTTGAGACTCTAGCAGGGACAAAATGGGGTACCAATCTTCGACATATGATTATCCGAGTGAGATGTAACGAGGATGTTATGGCATTATTAACATCAATTGCTAAAGAAAAGAAATCTCTGTTAATCCTGGGAACAGTTGGAACCTTATCCGTTGTTGAGTTTCTGCAGCAAGGAGGAAAACCTGTAACTTTTCAGGGAAAATTTATTATTATCTCATTGGCTGGTATAATTCTTTTTGATGGTGATACACAAATTAAGAGTGAAATGTATGTTTCAATTGGTGGAGCTGATGGCCAAGTGTTTGGAGGACCTGTCAATGGAAGATTACTTGTTTCAACTCCTTTACAGATGATTGGTTTGACTTTTGTTGATGGCCCCAACCCCACCAAAAAGCCATGTATTCCAAAAATGAAGAATAAGGTGAAGAAAAAAGGAGGTAGAACTCAAGAGAAAGGGAAAAACAAGGTTGCAGAAAAAGGAGGAGGAGGAGGAGGTAGCATTATAATAAAGGAGCTCAATGAGAATAAGAAGGTAGAGAAATCAAAGGGTGAAGAAGGTTCTTCAAATATTAATGAAGTGTCTTTGGCTGAATTTTTTGATGCAGAGCTGGAGCTAGCTCCTCATAACAAAGATGATGATCCATATGGTGATTTGGAAATGCTTGATTTTTTTCATGATCTAATGAAGTAG	2154	0.3988	MADPNQNEDNIFGTIYSPLNCGFNISSPTPFEDELYPNYQYYQYSAEDYCCYDDGFINSMPLFQHSFLPTPPNNLVNTIPSDPNSIQSSQNYNGGKLSEPNPIQSLDEATPPPPIVHPPPSSLPPLPNHGHDEPKSSIQFFEDTPPAIVHPPPSPLPSLPNCGDNQPKSSIQFFEDTPPPAIVHPLPSPLPLLPNRGDIEPKSSIQFFEDTPPPTIVHPPPSPLPPLPSGDDEPKSSIQFFEDTLPPTTITIVHPPHSPLPPLPNCGDDEPKSSSIQFFEDTLPPAIVHQPPSPNSIQCYENAHFVLVPPPSEPNPMKIPMVVNDQAAAIEEEVAPTTHNNAASVFDPLREIMFIPPPPPLFPIFMIGESSHCNEPIFFPNNCSNNNYHHSEIDNNPLAMIVANSSSSYNPMVAAPIPSHTETETRTEEHVAVNNNMMLMSKSKVDNHNKSSNKRKKNIIPLRSDFGDYSVAFRQGVPIVSQYDLLQKFETLAGTKWGTNLRHMIIRVRCNEDVMALLTSIAKEKKSLLILGTVGTLSVVEFLQQGGKPVTFQGKFIIISLAGIILFDGDTQIKSEMYVSIGGADGQVFGGPVNGRLLVSTPLQMIGLTFVDGPNPTKKPCIPKMKNKVKKKGGRTQEKGKNKVAEKGGGGGGSIIIKELNENKKVEKSKGEEGSSNINEVSLAEFFDAELELAPHNKDDDPYGDLEMLDFFHDLMK*	718

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g0099	717	Gene3D	-	501	624	-	-
	Aev01g0099	717	SUPERFAMILY	AF0104/ALDC/Ptd012-like	500	611	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	630	650	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	106	127	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	213	230	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	78	137	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	78	105	-	-
	Aev01g0099	717	MobiDBLite	consensus disorder prediction	203	237	-	-
	Aev01g0099	717	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	432	650	IPR039605	GO:0003680
	Aev01g0099	717	Pfam	Plants and Prokaryotes Conserved (PCC) domain	503	610	IPR005175	-
	Aev01g0099	717	ProSiteProfiles	PPC domain profile profile.	498	632	IPR005175	-
	Aev01g0099	717	CDD	DUF296	505	606	IPR005175	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g0099	498	613	AT-hook Motif Nuclear Localized (AHL) Family	AT4G12080	31.967	2.05e-10	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g0099	-		K25830	minc:123201726	61.6178