Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0093 ATGATGAGTGATTCAAAAGAGAAGGCAGAAGCAGGACAGAACGTGTCCTTGGCCGAAGAGAGTCGAGAAACCCAGCAATTGGTTGATAAACAGGTTCAGCCTGAAGCTCTGGCAGCTCCTGAGCCTATAGAGGAAACAACAAATCATGTTGAAGATGGCAAGGTAGAGGTTGATGCACCCAATGAGGAGAAAAATGAGAAGGCAGAGGCAGCTGCAGAGGATAAAAATGTGAAACCAGAAGCCAATTCAGAGGGCATTCCTCAACAAGATGTTGAAAATGGTACACATCAAGCGGTCCCTACAAAGGATGATGAACAAGCTTTGGATAAAACTGAGTGTGAACGCCCGTTGGATAAGAAGACTGAAGCTGAAGAAGCTTGCGAGAGTGATAAGGGTGTTAAGAATGGTGTTAGTGTTGGTAAAAACAATGATGATACTTTTGAAGTGGCAGTGGAGGCTAAGGTGGCTGATAGTGGAGCTTACAATGATGGTGACTCCATGCCCTCGACTCATACTGAGCCTATTATGCCAGCAGATCGAAAAGCTGAAATCAAGAATGGATTACAAATTGAGAATAGGGATAATGAAATGCTAATTGTTGTTGCACCTGCAGATAATGGGAACTCAACCTCAAAGAACTTGTGTTTTTTGGACGCTGACCATTCATATGATGGTAATGAGTCAGGAACAGATGAGGATCAATCAGCTTTTATGAAGGAGCTTGAAAATTTCTTTAGGGAGAGGAGCATGGAATTCAAACCTCCCAAGTTCTATGGAGAGGGGCTTAATTGCCTTAAGTTATGGAGAGCTGTAATCAGATTGGGCGGCTATGATAAGGTAACCACATGTAAATTATGGCGGCAAGTGGGAGAATCTTTCAAACCTCCTAAGACATGCACTACAGTTTCATGGACTTTTCGTGGATTTTATGAGAAGGCACTTCTTGATTATGAAAGGCATAAAACACAAGTTGGTGAGCTGAATCTGCCTATTGCTTCTATTTCAGAGCCTATGAATATTGAAAATCAGTCCCTCTTGCCTGCTGATAAGTCTGTCCAAGCTCTAGCATCAGGTAGAGCACGGAGAGATGCTGCAGCAAGAGCTATGCAGGGCTGGCACTCGCAGCGTCTCCTTGGTAATGGTGAAGTTAGTGATCCTATTATTAAGGATAGGAGTTCTTTGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAAAGCATCAATTTACTCAAACGTAAGACACCATCTTACCTGGACAACACAGTCAAAGCAGCGCGTAGTAAACTGCCATCTAAACCACAGTTGGAGACGTCTGTGATTGATATTGGACCTCCTGCTGATTGGGTAAAAATCAATGTGCAAAAAACTAAAGATTGTTTTGAGGTCTATGCCTTAGTTCCTGGCCTTCTCCGCGAAGAGGTTCGTGTTCAATCAGACCCTGCAGGACGCTTGGTCATAAGTGGTGAACCTGAGCATCTTGATAATCCATGGGGTGTGACACCTTTCAAAAAGGTTGTGTGCTTGCCATCAAGAATTGATCCTCATCAGACATCAGCTGTGGTGACCCTTCATGGACAGTTGTTTGTTCGAGTCCCATTTGAGCAATCAGAATAA 1611 0.4351 MMSDSKEKAEAGQNVSLAEESRETQQLVDKQVQPEALAAPEPIEETTNHVEDGKVEVDAPNEEKNEKAEAAAEDKNVKPEANSEGIPQQDVENGTHQAVPTKDDEQALDKTECERPLDKKTEAEEACESDKGVKNGVSVGKNNDDTFEVAVEAKVADSGAYNDGDSMPSTHTEPIMPADRKAEIKNGLQIENRDNEMLIVVAPADNGNSTSKNLCFLDADHSYDGNESGTDEDQSAFMKELENFFRERSMEFKPPKFYGEGLNCLKLWRAVIRLGGYDKVTTCKLWRQVGESFKPPKTCTTVSWTFRGFYEKALLDYERHKTQVGELNLPIASISEPMNIENQSLLPADKSVQALASGRARRDAAARAMQGWHSQRLLGNGEVSDPIIKDRSSLSVQKREKQLKSINLLKRKTPSYLDNTVKAARSKLPSKPQLETSVIDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHLDNPWGVTPFKKVVCLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0093 536 SMART ARID_2 228 318 - -
Aev01g0093 536 MobiDBLite consensus disorder prediction 97 131 - -
Aev01g0093 536 MobiDBLite consensus disorder prediction 17 31 - -
Aev01g0093 536 CDD ACD_sHsps_p23-like 455 531 - -
Aev01g0093 536 SUPERFAMILY ARID-like 226 333 IPR036431 GO:0003677
Aev01g0093 536 MobiDBLite consensus disorder prediction 1 139 - -
Aev01g0093 536 SUPERFAMILY HSP20-like chaperones 445 532 IPR008978 -
Aev01g0093 536 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 5 535 - -
Aev01g0093 536 SMART bright_3 232 323 IPR001606 GO:0003677
Aev01g0093 536 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 436 536 IPR002068 -
Aev01g0093 536 ProSiteProfiles ARID domain profile. 231 322 IPR001606 GO:0003677
Aev01g0093 536 CDD ARID 233 318 - -
Aev01g0093 536 Gene3D - 231 328 IPR036431 GO:0003677
Aev01g0093 536 Pfam Hsp20/alpha crystallin family 453 535 IPR002068 -
Aev01g0093 536 MobiDBLite consensus disorder prediction 45 80 - -
Aev01g0093 536 Pfam ARID/BRIGHT DNA binding domain 234 318 IPR001606 GO:0003677
Aev01g0093 536 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 5 535 IPR045147 GO:0006357
Aev01g0093 536 MobiDBLite consensus disorder prediction 82 96 - -
Aev01g0093 536 Gene3D - 436 536 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0093 Aev-Chr1 794484 798141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0093 226 534 ARID Transcription Factor Family AT1G76510 65.696 3.95e-136 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aev01g0093 HSP20 4.9e-05 CL0190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0093 - - gmx:100791081 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0305 05 2223667 2228867 Aev01g0093 01 794484 798141 PCT