Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0074 ATGGGATCCAGTGGTAGCAAAGCCAGTTCATCATCATCATCTTCTTCTTCTTCTTCATCTTCTTCTTTGGGGAGTTTCAGGAAAGGTCTTTATTCTAAGACACATAGAGGCTTTCGTTCTTTTTGTCTAGGGACAACTTCAGGATCTCACGACAGTGATCTTCAAGACCAGGGTTGTGATCAGCATAAAAAAAATGAGAGGGTTGTTACATTTACAAACGGCAATGAAACAGAGTCAGGTGAGGTGAAAACTGAGTCTTTTAGAAAGGTTAATAGCAGCATTCCCATCACTGCATCCAGAGCTGATAATAGCAGCTCCGTTCATGCATCTTCACCTGATTCCTTGAACCCTTCGAGTCGGTTCCTTTCTCGGTTTAGCCTCATTCCTGGTAATGTAAGCTTTAGACTTAGCAGAAGCACCAGTTTGGGGTCATCAAGACCCTGTCCTGTTTCTTCTGCAAGTCTCTCACTATTTGACGATGAAGATGAGCTTAATCAACACCATCCAGGACCTACTGGCAATATGATTAACAGAAATGAAACTCCACAATGTAGTGGCTTACTTCCCACTTCTTTTGTCAATCAAATGCCTGCACCGTGTCACCAAGATTATTCTAATCATTTGAGGTCAAATGCCACAGTTTCGGGTTTGTCTGGCAACTTGCAGAGCAATCCCACAAATGGAGTTGGTACAAGAGAAGAGCTGGATTTGAACTTATTTTCTCCTAGAATTCTGCCTGAGACAGAAAACAGTGATACTAGACATTCAGATAGAAGAAGTGGAGCTCAAGAACCAGTTGAAGGGAATGCTCATTTTAGCCGAGCTTTAAGTGTTGGAAGGCTTCGCAACAGAGTTTTTCGCCGATCAACATTATCTGAGCTAACATTTTGCCCTTCGCAACACGAGGGAGAAGTAAGAGATGCTAGTCAGGATACTGGAAGACATGTCGAGGAGGAGGATTCAAGAATGTCCCCATCTGATCACAATTCTGCTTCTATATCTGGATATCCTACGTCCGGCACATATAGCTCTGTGTTTAGCATCCATGACTATGAGGTTGAGACTTCAAGATCAAGAGAAAATAGTTATCAAGATCTACTGGAACATAGGTCTAATTTCCTTGAACGGAGAAGAAGAATACGGTCTCAGGTTCGTGCTCTTCAGCGGATGGGTAACCGGTTTGAAAATCATTCTGGACATGACAGATCATGCATCTTGTCTGGTCAACATAGAAATGGACATTGTGCTTGCCAAATCAGTAATCGCAATGGCAATTCAAACGATGAAACGAGTGCTGGAGCTAGCATATCAAGAATTGTTATGCTTGCAGAAGCCTTGTTTGAGGTTCTAGATGAAATTCATCAGCAATCTGTGGTTTTATCTTCCCGCCCATCCGTATCTCCTCTTGGATCTGTACCGGCACCAAATGAAGTTGTGGAGTCCTTACCTGTCAAATTATACACCAAGTTACATAATCATCAAGAAGATGCTGCACAATGCTATATATGCCTTGTGGAGTATGAGGATGGAGACAACATGCGAGTACTGCCGTGCCATCATGAATTTCACAGAACATGTGTAGATAAGTGGCTAAAGGAGGTTCACAGGGTGTGTCCACTGTGTAGAGGGGACATCTGCATATCTGATTCACAGCAAAAAGAAAACCCAAGTGGCTAG 1677 0.4281 MGSSGSKASSSSSSSSSSSSSSLGSFRKGLYSKTHRGFRSFCLGTTSGSHDSDLQDQGCDQHKKNERVVTFTNGNETESGEVKTESFRKVNSSIPITASRADNSSSVHASSPDSLNPSSRFLSRFSLIPGNVSFRLSRSTSLGSSRPCPVSSASLSLFDDEDELNQHHPGPTGNMINRNETPQCSGLLPTSFVNQMPAPCHQDYSNHLRSNATVSGLSGNLQSNPTNGVGTREELDLNLFSPRILPETENSDTRHSDRRSGAQEPVEGNAHFSRALSVGRLRNRVFRRSTLSELTFCPSQHEGEVRDASQDTGRHVEEEDSRMSPSDHNSASISGYPTSGTYSSVFSIHDYEVETSRSRENSYQDLLEHRSNFLERRRRIRSQVRALQRMGNRFENHSGHDRSCILSGQHRNGHCACQISNRNGNSNDETSAGASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSPLGSVPAPNEVVESLPVKLYTKLHNHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHRTCVDKWLKEVHRVCPLCRGDICISDSQQKENPSG* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0074 558 SUPERFAMILY RING/U-box 478 550 - -
Aev01g0074 558 Pfam Ring finger domain 499 542 IPR001841 -
Aev01g0074 558 ProSiteProfiles Zinc finger RING-type profile. 500 542 IPR001841 -
Aev01g0074 558 MobiDBLite consensus disorder prediction 162 182 - -
Aev01g0074 558 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 466 547 IPR013083 -
Aev01g0074 558 MobiDBLite consensus disorder prediction 300 336 - -
Aev01g0074 558 MobiDBLite consensus disorder prediction 45 65 - -
Aev01g0074 558 MobiDBLite consensus disorder prediction 1 26 - -
Aev01g0074 558 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 557 - -
Aev01g0074 558 MobiDBLite consensus disorder prediction 248 264 - -
Aev01g0074 558 MobiDBLite consensus disorder prediction 240 271 - -
Aev01g0074 558 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 557 - -
Aev01g0074 558 SMART ring_2 500 541 IPR001841 -
Aev01g0074 558 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0074 Aev-Chr1 622887 625795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0074 236 549 C3H Transcription Factor Family AT5G45290 58.567 5.30e-108 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0074 - - gmx:100800896 706.442