Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0043 ATGTCGGAGCAGGGTTCGTGCTCTGCCTCAACCGTGGAGGAAGCAAAAGAGAGAAAGCAGAAGAATAATAAGAAGGAGGTTCCTTTGCTCAAGCTCTTCTCATTTGCTGACTTGTATGATTGTGTCTTGATGGCTGTTGGATCCATTAGGGCATGTGTTCATGGTGCCTCCGTCCCCGTTTTCATTATTTTCTTTGGGAAGATCATCAATGTAATAGGCTTGGCTTACCTTTTTCCCAAGGAAGCTTCTCATCAAGTTGCCCAGTATTCATTGGATTTTGTGTATCTAAGTATAGTAATTTTGTTTTCATCTTGGACTTATTGGTCTGTCATCCCGGCAATGTCTTGGCCGGAACACGGCTATGATACAGCGCCACCGGTTCATCAATACAACACCCCACCGGCACTGATAGCATTCACGCTAGCAATCCTAGTGGTGTGCTTTGTGGCGTTCAGCATCGTCTACCTTTGCAAGTTCTGCCTTGTAAGCGTATCCCAATCTTGGGCCTTTGAACGCAGTGCCTCTGGCTCTCTAGTTCGCCTCTCACCCAACAGGTCTCCCTCTAGATCAGGAGGCATTGACCCTTCATTGCTCCACATGTTCCCAACCTTTGAGTATTCCTTCGTCAAGGAACTCCGCATCACGATGAAGAACAATGATAATAAGAAGAAAAAGAAGAAGCACTTCCTCGAATGCGCCATCTGCTTGCTGGAGTTCGAGGACGATAGCATGCTTCGCCTCTTACCTATTTGCTGCCATGTTTTCCACCAAGAGTGCATTGACCTCTGGCTCTGCTCCCACAAGACATGTCCTGTTTGCCGCACTGACCTCAATTTCCCTTCCTCAGACACCCGCCGCCGAATTAAACATGATAGTGAATTCAATAATAATAATAATCATAATCACGATGATGATGATGATGATGAAGATGAAGATGATGCAACAGAAGGAGATCATCCGTGTGAGGAGGAGGGTTCTGCAGGTGGGGACATACGCATTGACATAAGAGATGGGGAACTGGGTGATGATTGTGAAAGTGCAAGAGCAAGAGGAGAACATGATCATCATCAAGATCAAGATCAAGATCAAATGGGCGTGAACGTGCAGCAGCAGCAACAAGCAGAGCACACGAGGTCACACTCAACGGGGCATTCCATTGTTATGATTAAAGGAGAAGAAGTTGGGGTTGAAAAAGAAGGAGGAGGAGGAGATGACCATGATGATGATGATGATGACGACGACGATGAGTATACGTTGAGATTGCCAGAGCATGTTATAATACGAGCAACAAGATCATCATCATCAGGAGGACGACATAACTGTTCTAAGAGTTGTATTAGTTATCAAGAGATGCAGATCATGGCCACCACTAATTGCGGCTTCATGGAATCTCTATCAGCAGCGGCCTCCTCTCCTTCCCTCCCCTGTGCTCAAAAAGCTTGA 1443 0.4615 MSEQGSCSASTVEEAKERKQKNNKKEVPLLKLFSFADLYDCVLMAVGSIRACVHGASVPVFIIFFGKIINVIGLAYLFPKEASHQVAQYSLDFVYLSIVILFSSWTYWSVIPAMSWPEHGYDTAPPVHQYNTPPALIAFTLAILVVCFVAFSIVYLCKFCLVSVSQSWAFERSASGSLVRLSPNRSPSRSGGIDPSLLHMFPTFEYSFVKELRITMKNNDNKKKKKKHFLECAICLLEFEDDSMLRLLPICCHVFHQECIDLWLCSHKTCPVCRTDLNFPSSDTRRRIKHDSEFNNNNNHNHDDDDDDEDEDDATEGDHPCEEEGSAGGDIRIDIRDGELGDDCESARARGEHDHHQDQDQDQMGVNVQQQQQAEHTRSHSTGHSIVMIKGEEVGVEKEGGGGDDHDDDDDDDDDEYTLRLPEHVIIRATRSSSSGGRHNCSKSCISYQEMQIMATTNCGFMESLSAAASSPSLPCAQKA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0043 480 SMART ring_2 232 273 IPR001841 -
Aev01g0043 480 ProSiteProfiles Zinc finger RING-type profile. 232 274 IPR001841 -
Aev01g0043 480 Pfam Ring finger domain 231 274 IPR001841 -
Aev01g0043 480 MobiDBLite consensus disorder prediction 403 417 - -
Aev01g0043 480 Gene3D ABC transporter type 1, transmembrane domain 22 115 IPR036640 GO:0005524|GO:0016021
Aev01g0043 480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 280 IPR013083 -
Aev01g0043 480 MobiDBLite consensus disorder prediction 290 417 - -
Aev01g0043 480 MobiDBLite consensus disorder prediction 320 361 - -
Aev01g0043 480 SUPERFAMILY RING/U-box 231 280 - -
Aev01g0043 480 PANTHER RING FINGER DOMAIN-CONTAINING 123 435 - -
Aev01g0043 480 CDD RING-H2_EL5_like 231 274 - -
Aev01g0043 480 MobiDBLite consensus disorder prediction 303 319 - -
Aev01g0043 480 MobiDBLite consensus disorder prediction 362 384 - -
Aev01g0043 480 PANTHER RING-H2 FINGER PROTEIN ATL29 123 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0043 Aev-Chr1 377883 379977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0043 134 437 Rapid Response to Elicitors AT2G35000 29.967 7.27e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0043 - - gmx:100815505 273.092