Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0038 ATGGAGTCTGGTGAGAGTGAGCGTATATCTGTCAGAGAGGTGTGTGCAAATGGGAGTTGCATGAAAACAACAGAAGTTGAGGCCAAGCTGGATGAAGGCAACATTCAAGAAGCAGAAGCAGCACTGCGAGAAGGCTTGTCTCTCAATTTTGAGGAAGCTAGAGCTCTTCTGGGAAAGTTAGAGTATCAGAGAGGTAACGTAGAAGGGGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAACAGCCATACAGCGACTACAACCTTCCCTTTCTGAAAAGCCAGCCAAGAAGGGTCCTTCTCGCACAGAGTCTCCTTCTTCAGTCTCCCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTTTTTAAAATCCAAATCCCTACAAAAATTGGGGAAGTTTAATGAAGCTGCTAATGAATGCAAGCGTGTTCTTGATGCTGTTGAGAAGATATTTTATCAGGGCATACCAGATGTTCAAGTGGACAACAAATTGCAAGAAATTGTTAGCCATGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAGGCTGGTTGCTATAACGAGGCAATATCTGCTTATAGGCATGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCAAGAATTCAGAAATCATTTGCTGTATTTTTGCTGTACAGTGGGGTGGAGGCAAGTCCACCCAGTTTAGCAGTTCAGACTGAAGGCTCTTATGTACCAAAAAATAATCTGGAAGAGGTAGTTCTTCTTCTAATGATTCTTTTGAGAAAGTTTTGCCTTGGTAAGACAAAATGGGATCCCTCAGTTATGGAACACCTGACATTTGCACTTTCAGTGTGTGGCCAAACTTCTGTTTTATCAAAACAATTTGAAGAGTTGATACCTGGTGTATATCATCGAATTGACCGTTGGAACTCTTTAGCCATGTGTCTCAGTGCATCTGGACAAAATAAAATTGCTTTGAGCCTCCTGAGAAAGTCCTTGCACAGACATGAACGACCAAACGACATTACGTCATTGTTATTGGCAGCCAGGATTTGCAGTGAGGATCCTCACCTTGCTGCTGAGGGAGTAGGCTATGCACAGAGGGCACTAGCTAATGCTCAAGGCCTAGATGAGCATTTAAAAGGCGTGGCTCTTCGGATGTTGGGACTTTGCCTGGGAAAGCAAGCTAAGGTTGCTTCCTCTGACTATGAAAGGTCTCACCTTCAGGCCAATGCTCTCAAATCATTGGAGGAGGCAGTTAGATTGGAGCAAAAAAATTCTGATCTAATTTTAGAGTTGGCAGTTCAGTATGCAGAGCACCGAAATTTGACTGCTGCTTTACGCTATGCCAAGCAGTTCTTTGATGAAACTGGTGGATCTGTTTTGAAAGGTTGGAGATTGCTGGCTCTAGTCTTGTCTGCACAAAAAAGATTTACGGAGGCTGAAGTGGTGACTGATGCTGCTTTAGATGAGACTGCGAAATGGGAGCAGGGGCCACTTCTCAGGCTGAAAGCGAAGCTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACTTATCGATACCTTCTTGCATTGGTCCAAGCCCAGAGGAAGTCCTTTGGGCCCAACAGAATTGGTTCACAGGTTGTGGATGATAAGGTTGATGAATTTGATGTTTGGCATGGTATCATGTTCGATGGCCGTGGACAAAGTATAGAAGCTCTAGCTGCTGCTGCCAATGCTGTCCTGACCGAATCGAACCATGTTCCAAGCAAGGTCTTGATGGGTGCTACAATGCTGAAAATGGGTGCAAAAGCTTTGCCTGCTGCTAGAAGCTTACTTTCCGATGCACTCAGAATCGAACCAACGAACCGCATGGCTTGGTATCACTTGGGATTGATGCACAAGAGTGACGGGCGAATTGCCGACGCTGCTGACTGCTTCCAGGCAGCTTCCATGCTTGAAGAATCTGATCCCATTGAAAGTTTCAGCAACATACTGTGA 1974 0.4514 MESGESERISVREVCANGSCMKTTEVEAKLDEGNIQEAEAALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQTAIQRLQPSLSEKPAKKGPSRTESPSSVSQHAASLVLEAIFLKSKSLQKLGKFNEAANECKRVLDAVEKIFYQGIPDVQVDNKLQEIVSHAVELLPELWKQAGCYNEAISAYRHALLSQWNLDNDCCARIQKSFAVFLLYSGVEASPPSLAVQTEGSYVPKNNLEEVVLLLMILLRKFCLGKTKWDPSVMEHLTFALSVCGQTSVLSKQFEELIPGVYHRIDRWNSLAMCLSASGQNKIALSLLRKSLHRHERPNDITSLLLAARICSEDPHLAAEGVGYAQRALANAQGLDEHLKGVALRMLGLCLGKQAKVASSDYERSHLQANALKSLEEAVRLEQKNSDLILELAVQYAEHRNLTAALRYAKQFFDETGGSVLKGWRLLALVLSAQKRFTEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSRPMDAIETYRYLLALVQAQRKSFGPNRIGSQVVDDKVDEFDVWHGIMFDGRGQSIEALAAAANAVLTESNHVPSKVLMGATMLKMGAKALPAARSLLSDALRIEPTNRMAWYHLGLMHKSDGRIADAADCFQAASMLEESDPIESFSNIL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0038 657 SMART tpr_5 117 150 IPR019734 GO:0005515
Aev01g0038 657 SMART tpr_5 457 490 IPR019734 GO:0005515
Aev01g0038 657 SMART tpr_5 615 648 IPR019734 GO:0005515
Aev01g0038 657 SMART tpr_5 301 334 IPR019734 GO:0005515
Aev01g0038 657 ProSiteProfiles TPR repeat profile. 615 648 IPR019734 GO:0005515
Aev01g0038 657 Gene3D Tetratricopeptide repeat domain 271 534 IPR011990 GO:0005515
Aev01g0038 657 Gene3D Tetratricopeptide repeat domain 26 218 IPR011990 GO:0005515
Aev01g0038 657 Gene3D - 554 650 - -
Aev01g0038 657 SUPERFAMILY TPR-like 33 449 IPR011990 GO:0005515
Aev01g0038 657 PANTHER CALMODULIN-BINDING PROTEIN 1 553 - -
Aev01g0038 657 PANTHER CALMODULIN-BINDING PROTEIN 552 656 - -
Aev01g0038 657 PANTHER PROTEIN NPG1 552 656 IPR043376 -
Aev01g0038 657 MobiDBLite consensus disorder prediction 88 108 - -
Aev01g0038 657 PANTHER PROTEIN NPG1 1 553 IPR043376 -
Aev01g0038 657 SUPERFAMILY TPR-like 404 639 IPR011990 GO:0005515
Aev01g0038 657 Pfam Tetratricopeptide repeat 28 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0038 Aev-Chr1 333655 337147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0038 2 657 Calmodulin-binding Proteins AT2G43040 69.971 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0038 K21843 - gmx:100811897 1030.39