Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2228 ATGTCGCAGCAGGAGCAGCAAGGGTTCGCGATCGAGCTATACTTAGACCCAGCGCTGGAGAATCAGGTTCTGAAGGCGTGGAACGTGCTCGCTCGTAGACAAATCAGCACTCACCTGATCGAAATGGAGTCGCGGCCACACATAACCCTATTCTCATCACCCTTTCTAGAACCTTCCAAGCTCGAATCTCTCCTTAAAGCCTTCGCATCGAAGCACGAGCCTCTCCCTCTCACTTTCTCCTCCCTCGCCACTTTCCCCAACGACAACAACAACCTCCTTTTCCTAGCGCCAACCCCTTCGCTCTCGCTCCTCCACTTTCAGTCACAGCTCTGTGACGCTATCAGAAAAGAAGGCATCGATGTCGCCGACGAATACGCTTTCAATTCATGGATCCCTTACTGCTCCGTCGCGCACCATGTCCCCAAAACAAGAATGCCTGAGGCTTTCTCGCTCTTGAGGGAACTGAAACTCCCGGTTTCCGGTTACGCTATGGATATCGCTCTCGTACAGTTCTCTCCGGTTCGCGAACTCTTCTCCTCTGTGCTCGGCAACAATGTGTATAAGAACAGTTAA 573 0.5218 MSQQEQQGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSSPFLEPSKLESLLKAFASKHEPLPLTFSSLATFPNDNNNLLFLAPTPSLSLLHFQSQLCDAIRKEGIDVADEYAFNSWIPYCSVAHHVPKTRMPEAFSLLRELKLPVSGYAMDIALVQFSPVRELFSSVLGNNVYKNS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2228 190 PANTHER - 7 187 - -
Aed9g2228 190 Gene3D Cyclic phosphodiesterase 9 178 - -
Aed9g2228 190 Pfam 2'-5' RNA ligase superfamily 45 169 - -
Aed9g2228 190 SUPERFAMILY LigT-like 3 141 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2228 Aed-Chr9 25480289 25489131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2228 7 186 Calmodulin-binding Proteins AT5G40190 63.889 1.81e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2228 - - gmx:100305618 339.347