Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2227 ATGGCGGATTGGAGGAGGAGATCTGTGACGCCGGACGAAGCTCGGATCGACTCGGATGATGGCGGATTATGCATGGGAGCGGTGGATGGACGCAAGATTCGCGCTGGTGATTGTGCACTTTTCAAGCCACCCAGGGACTCCCCTCCTTTTATTGGAATAATTCGCAAGTTAACATTTGATGATAAAGAAGAAAGTCCGAATTTAGAAGTGAATTGGCTATACCGACCTGCTGATTTGAAACTTGCTAAAGGAATTGTACTGGAAGCTGCTCCAAACGAAGTTTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTTCTTCGTAAAGGTGTTGAACTTCCTTCCGGGATATCTGCATTTGTCTGTCGACGGGTTTATGACATTGAGAACAATTGTTTATGGTGGCTAACTGATAAGGATTACCTTAATGAACGACAGGAAGAAGTTAATCAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACATCAACACAGCCATTGAAATCTGGTTCTGACAACGTTCAAAATAGTTCTTCCTTTGGTGCACAGGGTAAGGGGAAAAAGAGAGAGCGGGGTGATCAGGGTGCTGATTCATCTAAAAAGGAGCGGTTATTTAAGGTAGAAGATGGAGATTCTGGTCAATTTAGACCGGAGAACATGTTAAAGTCTGAGATTGCTAAAATTACCGATACTAAAGGTGGGCTTGTGGACTTTGAAGCAGTTGAAAGACTGGTACAGCTTATGCAACCTGATAGTGGTGATAGAAAAATAGATTTGGCAGGGCGGATGTTGCTTGTTGATGTAATTGCACTTACGGACCGGTATGAGTGTCTATGCGGGTTTGTACAACACAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAGGAGGTCCACAAGGGAAAGCCTGGTGATGGAAGTATGCCTAAAGAAAGTGATAAGTCCGTTGATGAATTTTTGTTAGCGTTACTTCGTGCGTTGGATAAGCTTCCCGTGAACCTTCATGCACTGCAAACCTGTAATGTTGGAAAGTCTGTTAATCATTTACGCACCCACAAAAATTATGAAATTCAGAGGAAGGCTAGGAGTTTAGTGGACACATGGAAGAAACGCGTGGAAGCTGAAATGAATATGAATGATTCGAAATCTGGTTCAAACCGTGCCATGTCTTGGCCAGCAAAGCCAGCGAATTCCGAGTCTCCTCATGTCGGAAATAGGAAAACAGGAGGATCCTCTGATAATGTTGCAAAAAGCTCTTCAATTCAACCCGCAATATCTAAAAATTCCCAATCTAAGTTAAGTTCTGGAGAACCATTGACCAAGTCCTCTTCATCTCCTGGCTCAACTAAACCAGTGACTATCCCAGCGGGCAGTAACTCAAAAGATCAAAACAGTAAAGTCTTGGTTGGAGCTGCAACTTCAGATCTACCTCTGACACCTATCAAGGAGGAGAGGAGTAGCAGTTCTAGTCAATCTCAAAATAACAGTATATCTTGTTCTAGTGAACATGCTAAAACTATTGGTTCTTGCAGGGAAGATGCAAAGAGCTCCACTGCAGTGTCGACTAGTGTGGGCAAAATTCCTGGTGGTGCGTCTCGAACTCGCAAGTCAAGCAATGGTCTACATGGGGCTGGTGTTGCAGTAGGTCAGAAGGAGCACAGCTCTGCAAAAAATTCAACTAGAAATTCACCTTCTGAAAAAGTTTCACCAACTCGAGTCTCTCATGAAAAATCAGCTGACCAGCCCCTTACTGATCAAGGAAATAATCAGCGATTGATTCTCAGGTTGCCAAATACTGTTCGCAGTCCTTCAAGGGGAGCTAGCGGGGGCTCTTTTGAAGAACCAGCTATCATGTGCGGCAAAGTCTCGTCTCCTGCTGACAGGAATGAGAATCAAGACAGAAGAGTGAAAACTAAAACCGAGTGTTTGCTGACCCATGTGTCAAATATGATGAATGAGGCATGTGATGCTAGTGAAGCTCTGCTTGGTGTTGATGAAGGTAAGGGCCCTCCAATGGCTGATGAGCAATGCAGGGCTAATGAAGATGGTGATAAGGTAGCAGAAACATCAAAACAAACTAGTTTGTCATCTGGATTTGTTTCCAGATCTGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTAGTTGAAAGCTGTGTGAAAATTTCTGAAGCAAGTGCATCTGTGTCCCATGGAGATGATGGGATGAACTTGCTAGCTACTGTGGCTGCAGGGGAAATATCAAGATCTGAAAATGCTTCACCTTTGGCATCCCCCGAGAGAAAGTCTCCTCCTGCTGATGAATTGAGCTCAGGCAATGATTCGAAGTTAAAACAATCTGGTGAAGCAGCTGTATGCACTCTTTCACAGTCGGATGGTGGGGCTACTGCAGAGCATCCTTTGAATACAATTGATTCTTTGCAGATAAAAAATGATTTGAGGCATCCTGCTACATGTGATTTTTCAGGTGATGGTGAAGCCATTTCATCCAGTTGTGTAGAGAAAAGTGGTGATGGTAGAACTCAATTAAATACCTCCCCTACAGATTTGTTACAAAATGCTGAAGGTCCATGCTTACGGCCTGAAACCAAAGATGATAATTCTGAAACTATAATGCCAGCTAAAAAGGAGACTGATGCAGATCCTGGAGGTTCAGACTCTAAATTAAAGTCAAGGTCTTCCTCTTTTGATGATGATCAGAAGGTTGATCACATGGATGAGGAAACCATTGAGAATGAGAAAATGTTGGTTCCAAAAACTGTTGTAAGTGTTAAGTCTGAAAATGAATCAGGTGAAAAACAACCTGAGTTATCCTCAGCTGTAGATAATGAGAACCAGATTAGTGCAGAGAAAACAACAGGTACTGGTGTGCTAGTGCAAAAGGACTCTCCAGTTGCAGATAACCGTGAGTCTTTATATATAAAAAAGGAGTCACCTACTTCTAGTAATGCTGTAATGGTATCCAGGGATGAAAATACTGATGGCATGAAGTCAGTTGTGATTGAGCCTGATGAAAGAGGAATGGAGCAGGATTTATCAGTTTCAGATGATGTTAATGAATGTTCTGAAGATAATATGGGTAGAAAAGAGGCTATTGGTCAGTGTTCTGGCTCATCAGATTTACCAACAATGCCTAGGAAAGAGAATGATGTGCCCAAAGCATGTGAGCTAAAGTTGGATGCAAATCAATCTGAGGTTGCAGGTTTGAAGCAAGCAGGTTCTGCTTCTGGGCCTGATACAGCTGTAAAACTTGACTTTGATTTAAACGAAGGCTTTCCTGTTGATGATGTAAGTCAAGGGGAGATTGTTAGACAGGAAGATCCTGTCACATCATCTGCAGTTCATGTTCCTTGCCCATTGCCTTTTCCCATGTCTTCCATCTCTGGGGGCTTTCATGCTTCAATTACAGTGGCATCTGCTGCCAAAGGGCCGGTTGTTCTACCTGAAAACCCATTGCGGATTAAGGGGGAGCTTGGATGGAAAGGATCTGCTGCTACCAGTGCATTTCGGCCAGCTGAACCTAGGAAAAATTCTGAGACACCATCCACCACTAATGATGTTGCTTCTGTTGATGTCACTTCTATCAAACAAGGTCGTCCTCCCTTAGATTTTGACTTAAATGTGGCAGATGAAAGATCTTTTGAGGATGTTGGTTCACGTGGTTCTTTAGAATCTGGACCACATGATCGTAGCACTGGGGGATTTGATCTTGATTTAAACAAAGTTGATGAGACTCCTGAAGTTGGTGGTACTTTCTTGATAAACAAACTGGATATTCCTTCTTTACCAAGTAAGCCTTCGTTGTCCAGTGGGTTATCTAATGGTGGAAGTGTCTCCAGAGACTTTGACTTAAATAACGGGCCAGGCCTTGATGAAGTTGGCAGTGAAGTCCCTGCACGCAGTCAGCAGATGAAAAATACTGTACCATTTCCAACTTCTGTTCATGGCCCAAGAACAAACAATGCTGAATTTGGGAATTATTCTGCATGGTTTCCTCAGGTCAATTCTTATTCTGCAATTACCGTCCCACCACTTCTGTCTGGTAGAGGGGAGCAGAGTTATGTTGCTGGTCCTGGGGCCCAACGGATAATGGGTCCTACAGGTAGCGCTCCATTCTCTCCTGAAATCTACAGGGGACCAGTGCTTTCATCCTCTCCAGCCGTTGCTTATCCACCTACTACACCTTTTCCCTATCAAGGATTTCCATTTGAAACCAATTTTCCACTATCTTCAAACTCCTTTTCTGGTTGTTCAACAGCATTTATGGATTCGTCAACTGTGGGCGGATTATGCTTTCCTACCATGCCCTCACAGCCAGTTGGGCCTGGTGGTGTTGTTTCTTCCACGTATCCCCGTCCATATGTTATGAGTCTTCAAGGTGGTACAAGTAATGTGATTCCTGACAGCAGAAAATGGGGAAGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTACAGATACTGAACGAAGAGATGATAGATTGCCTTCAGGATTGAGGCAAATGTCTGTCCCCAATTCACAGGCCTCGATGGAGGACCACTTGAAGATGTTTCAGATGGCAGGTGCATTGAAAAGAAAAGAACCTGATGGTGGTTGGGATGGAGCTGAGAGATTCGGTTACAAGCAACCTTCATGGCAGTAG 4725 0.4379 MADWRRRSVTPDEARIDSDDGGLCMGAVDGRKIRAGDCALFKPPRDSPPFIGIIRKLTFDDKEESPNLEVNWLYRPADLKLAKGIVLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIENNCLWWLTDKDYLNERQEEVNQLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQPLKSGSDNVQNSSSFGAQGKGKKRERGDQGADSSKKERLFKVEDGDSGQFRPENMLKSEIAKITDTKGGLVDFEAVERLVQLMQPDSGDRKIDLAGRMLLVDVIALTDRYECLCGFVQHRGLPVLDEWLQEVHKGKPGDGSMPKESDKSVDEFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNYEIQRKARSLVDTWKKRVEAEMNMNDSKSGSNRAMSWPAKPANSESPHVGNRKTGGSSDNVAKSSSIQPAISKNSQSKLSSGEPLTKSSSSPGSTKPVTIPAGSNSKDQNSKVLVGAATSDLPLTPIKEERSSSSSQSQNNSISCSSEHAKTIGSCREDAKSSTAVSTSVGKIPGGASRTRKSSNGLHGAGVAVGQKEHSSAKNSTRNSPSEKVSPTRVSHEKSADQPLTDQGNNQRLILRLPNTVRSPSRGASGGSFEEPAIMCGKVSSPADRNENQDRRVKTKTECLLTHVSNMMNEACDASEALLGVDEGKGPPMADEQCRANEDGDKVAETSKQTSLSSGFVSRSGQTYDASLSPMNALVESCVKISEASASVSHGDDGMNLLATVAAGEISRSENASPLASPERKSPPADELSSGNDSKLKQSGEAAVCTLSQSDGGATAEHPLNTIDSLQIKNDLRHPATCDFSGDGEAISSSCVEKSGDGRTQLNTSPTDLLQNAEGPCLRPETKDDNSETIMPAKKETDADPGGSDSKLKSRSSSFDDDQKVDHMDEETIENEKMLVPKTVVSVKSENESGEKQPELSSAVDNENQISAEKTTGTGVLVQKDSPVADNRESLYIKKESPTSSNAVMVSRDENTDGMKSVVIEPDERGMEQDLSVSDDVNECSEDNMGRKEAIGQCSGSSDLPTMPRKENDVPKACELKLDANQSEVAGLKQAGSASGPDTAVKLDFDLNEGFPVDDVSQGEIVRQEDPVTSSAVHVPCPLPFPMSSISGGFHASITVASAAKGPVVLPENPLRIKGELGWKGSAATSAFRPAEPRKNSETPSTTNDVASVDVTSIKQGRPPLDFDLNVADERSFEDVGSRGSLESGPHDRSTGGFDLDLNKVDETPEVGGTFLINKLDIPSLPSKPSLSSGLSNGGSVSRDFDLNNGPGLDEVGSEVPARSQQMKNTVPFPTSVHGPRTNNAEFGNYSAWFPQVNSYSAITVPPLLSGRGEQSYVAGPGAQRIMGPTGSAPFSPEIYRGPVLSSSPAVAYPPTTPFPYQGFPFETNFPLSSNSFSGCSTAFMDSSTVGGLCFPTMPSQPVGPGGVVSSTYPRPYVMSLQGGTSNVIPDSRKWGSQSLDLNSGPGGTDTERRDDRLPSGLRQMSVPNSQASMEDHLKMFQMAGALKRKEPDGGWDGAERFGYKQPSWQ 1574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2227 1574 MobiDBLite consensus disorder prediction 181 209 - -
Aed9g2227 1574 Pfam BAH domain 33 139 IPR001025 GO:0003682
Aed9g2227 1574 MobiDBLite consensus disorder prediction 795 826 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1191 1267 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 886 941 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 426 495 - -
Aed9g2227 1574 SMART BAH_4 31 147 IPR001025 GO:0003682
Aed9g2227 1574 MobiDBLite consensus disorder prediction 577 620 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 400 620 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 776 826 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1553 1574 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1203 1219 - -
Aed9g2227 1574 SMART TFS2_5 320 399 IPR003617 GO:0005634
Aed9g2227 1574 Gene3D - 27 243 IPR043151 -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1290 1308 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 950 986 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1002 1016 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 210 241 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 403 418 - -
Aed9g2227 1574 CDD TFIIS_I 334 398 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 855 1048 - -
Aed9g2227 1574 ProSiteProfiles TFIIS N-terminal domain profile. 314 400 IPR017923 -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 170 242 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 714 729 - -
Aed9g2227 1574 PANTHER BAH DOMAIN-CONTAINING PROTEIN 28 1574 - -
Aed9g2227 1574 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 28 1574 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1492 1539 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 861 879 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1022 1040 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1290 1331 - -
Aed9g2227 1574 Pfam TFIIS helical bundle-like domain 348 397 IPR017923 -
Aed9g2227 1574 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 265 401 IPR035441 -
Aed9g2227 1574 ProSiteProfiles BAH domain profile. 31 147 IPR001025 GO:0003682
Aed9g2227 1574 MobiDBLite consensus disorder prediction 1492 1510 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 696 713 - -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 505 564 - -
Aed9g2227 1574 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 304 411 IPR035441 -
Aed9g2227 1574 MobiDBLite consensus disorder prediction 695 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2227 Aed-Chr9 25470770 25478869 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aed9g2227 BAH 7.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2227 - - gmx:112998769 2727.2