Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2215 ATGTCTCCGTTTTCTCTCTTCCTCTTGGCCGCATTGCTGTCCCTCACCTGCTCCTTCTCCACGGCGCGGCTGACGCTGGACTTCTACAAGTCGACGTGTCCGCAGTTCAGCCAGATCATAAGGGACACAGTGACCTCGAAGCAGATCGCGAGCCCCTCCACCGCCCCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCTCCCCAACGGCTGCGACGCCTCCATCCTCCTCTCCTCCACCCCCTTCTCCAAAGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGATGCTTTCGACCTCGTCGTCCGTGCCAAGACCGCCCTCGAACTCGCCTGCCCCAACACCGTCTCCTGCGCCGACATCCTCTCCGCCGCCACCCGCGACCTCCTTACCATGCTCGGCGGCCCTTTCTACCCAGTCTTTCTCGGCCGCCGCGACGGCCGCAGCTCCATCGCCGCCTCCGTCCCCAACCACCTCCCCCCCCCCTCCATGCCCATCCCCCAAATCACGCAAATCTTCACCCAACGCGGCTTCTCCGTCGAGGAATTCGTCGCTCTCACCGGGGCCCACACCGTCGGATTCTCCCACTGCTCCGAATTTGTCACCAACCTCTCCAACTCCACTTCCTACAACCCTCGCTACGCTCAGGGACTCCAGAAAGCCTGCGCCGATTACAAAACTAACCCCACTCTCTCCGTCTTCAACGACATCATGACGCCCAACAAGTTCGACAATGCTTACTTCCAGAACCTTCCTAAAGGCCTTGGCGTGTTGAAATCTGATCACGGTTTGTACGGCGACCCTTCTACCAGACCCTTCGTGGAGAGCTTCGCCAAGGATCAAAATAGATTCTTTCAGGTTTTTGCAAGAGCGATGCAGAAGTTGAGTCTCTTGAATGTTCAGACGGGGAGGAAAGGAGAGATCAGGCGCAGGCTGGATAATAGTACCATAATGCAGTTAACGTGGGACCTGGTATCATGGTTTCTTTTCCATGCACCACGGGCAGTGTTGTTAACTGTTATAATTCTTCACGACGTTAAAACATCTTTATTGATTATTGCTGAAAAGAAAACTTTATCATGGAATCCGGAACATCTTTGTGGTGGTTTGATTTTGGCATACGCGGTTTGGCTTGGTTCCAGACCAATTAGGGATTTGCTTCCTGCACCTCCCACTTTGGTGTATATGAACAAAATTGCCCCCAACTCTAACACCCCCTTGCCCTCTGCACAGCTGCCGTCACCCCCTTCCCCTTTTCCTCACCTCTACGCTGTCATGTCCTCACCTCCCTCTGATGCTCGCCTTCGCCGTCATGCTTGCCTCCCTCGCGCTGCACTCACCTTGGCTCTTAGATCGGGGAGAAAGAGGAGGAGGCAGATTTGGTGTACATTGTGTCTTGTTCAGCAGCATGATCTTGCAGCTCGGATTGGAGCTGTGGGCCACCAAACTACAATTGTGGTGCTGCCTGATTACTCTATGGGTCCACCCTTTGCTTTTGTAATCTGTTTTGCCCAAAGAGAGCAAAACATGAGCACGTTAACATGA 1554 0.5515 MSPFSLFLLAALLSLTCSFSTARLTLDFYKSTCPQFSQIIRDTVTSKQIASPSTAPATLRLFLHDCLLPNGCDASILLSSTPFSKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSAATRDLLTMLGGPFYPVFLGRRDGRSSIAASVPNHLPPPSMPIPQITQIFTQRGFSVEEFVALTGAHTVGFSHCSEFVTNLSNSTSYNPRYAQGLQKACADYKTNPTLSVFNDIMTPNKFDNAYFQNLPKGLGVLKSDHGLYGDPSTRPFVESFAKDQNRFFQVFARAMQKLSLLNVQTGRKGEIRRRLDNSTIMQLTWDLVSWFLFHAPRAVLLTVIILHDVKTSLLIIAEKKTLSWNPEHLCGGLILAYAVWLGSRPIRDLLPAPPTLVYMNKIAPNSNTPLPSAQLPSPPSPFPHLYAVMSSPPSDARLRRHACLPRAALTLALRSGRKRRRQIWCTLCLVQQHDLAARIGAVGHQTTIVVLPDYSMGPPFAFVICFAQREQNMSTLT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2215 517 PANTHER - 6 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 Pfam Peroxidase 46 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 Gene3D Peroxidase, domain 2 163 298 - -
Aed9g2215 517 Coils Coil 506 517 - -
Aed9g2215 517 Gene3D - 27 313 - -
Aed9g2215 517 CDD secretory_peroxidase 24 314 IPR033905 GO:0004601|GO:0042744
Aed9g2215 517 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PANTHER PEROXIDASE 31 6 317 - -
Aed9g2215 517 SUPERFAMILY Heme-dependent peroxidases 24 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed9g2215 517 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2215 Aed-Chr9 25364529 25368851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2215 22 316 Peroxidase AT3G28200 65.878 1.00e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2215 K00430 - gmx:100817030 554.673