Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2212 ATGATAAAGCTAAAAAGCCCTCAACCCAGTGTAATCGAAGAAGCGCTTCTCTCTCTCAGAAAACTCACGAGGGTAAGAGAAGAAACAAGGCTTCAACTTTGCACCCCTCGGTTACTCTCTGCGCTACGCTCGCTCGTTGTGTCGAAGCACGTGAGCGTTCAGGTGAACGCTCTGGCGTCGGTGGTGAACCTCTCGTTGGAGAAGAGCAACAAGGTGAAGATCGTGCGGTCGGGGATGGTTCCGCCGTTGATCGAGGTTCTGAAGTGTGGATCCTCTGAGGCGCAGGAGCACAGTGCGGGCGCGTTGTTTAGTTTGGCTCTTGATGACGACAACAAAACCGCGATTGGGGTTTTGGGTGGCTTGGCTCCGCTGCTTCACATGCTCCGATCCGAGAGCGAGCGGACTCGGCATGACTCGGCCTTGGCGCTTTACCATTTGTCTTTGGTCCAGAGCAACCGGTCCAAGATGGTTAAACTCGGTTCGGTTTCGGTTCTTTTGAATATGGTTAAGTCAGGTCACATGACGGGTCGGGTTCTGTTAATTTTGGGGAATCTGGGCTCCGGGTCGGACGGGCGGGCCGCAATGTTAGATGCGGGTGTGGTGGAGTGTTTAATAGGGTTGCTGAGTGGGCCGGAGTTGGGGACCGGGTCGACTCGGGAGAGTTGCGTGGCGGTGATGTACGCGCTGAGTCACGGTGGGTTAAGGTTTAAGGCGGTGGCGAAGGCGGCGGGGATGGTGGAGGTGTTGCAAAAGGTGGAGAAAGTGGGGAGTGAGAGGAGTAGGCATAAGGTGAGAAAGATATTGGAGGTGATGAGGGCTAAGGAGGTGGAGGAGGAGGAAGTGGATTGGGAGGAGTTGCTTGACTCGGGGTTGGGTAGCCGGACTCGGAGTAGACTCGGTGGTGGGTTGGACGAGTCAAGTTCTAACTCGGCCGAGTTTTGA 942 0.5541 MIKLKSPQPSVIEEALLSLRKLTRVREETRLQLCTPRLLSALRSLVVSKHVSVQVNALASVVNLSLEKSNKVKIVRSGMVPPLIEVLKCGSSEAQEHSAGALFSLALDDDNKTAIGVLGGLAPLLHMLRSESERTRHDSALALYHLSLVQSNRSKMVKLGSVSVLLNMVKSGHMTGRVLLILGNLGSGSDGRAAMLDAGVVECLIGLLSGPELGTGSTRESCVAVMYALSHGGLRFKAVAKAAGMVEVLQKVEKVGSERSRHKVRKILEVMRAKEVEEEEVDWEELLDSGLGSRTRSRLGGGLDESSSNSAEF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2212 313 Pfam Armadillo/beta-catenin-like repeat 108 147 IPR000225 GO:0005515
Aed9g2212 313 Pfam Armadillo/beta-catenin-like repeat 70 106 IPR000225 GO:0005515
Aed9g2212 313 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 2 302 - -
Aed9g2212 313 PANTHER U BOX DOMAIN-CONTAINING 2 302 - -
Aed9g2212 313 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 78 120 IPR000225 GO:0005515
Aed9g2212 313 SMART arm_5 26 66 IPR000225 GO:0005515
Aed9g2212 313 SMART arm_5 188 231 IPR000225 GO:0005515
Aed9g2212 313 SMART arm_5 108 148 IPR000225 GO:0005515
Aed9g2212 313 SMART arm_5 67 107 IPR000225 GO:0005515
Aed9g2212 313 SUPERFAMILY ARM repeat 4 264 IPR016024 -
Aed9g2212 313 Gene3D - 1 270 IPR011989 -
Aed9g2212 313 MobiDBLite consensus disorder prediction 292 313 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2212 1 313 U-box Gene Family AT5G40140 64.263 1.03e-132 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2212 - - gmx:100798675 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2212 9 25361235 25362176 Aed3g0439 3 3124967 3130261 PCT