Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2210 ATGGCATCCGGTGGAACCGAAGCTTTTCCGGATTTGGGTAAACACTGCCAGCATCGCGATTGCAACCAGCTTGATTTTCTTCCTTTCACTTGCGACGGTTGCCAACAGGTGTTTTGTGTGGAACACAGATCTTGCAAGTCCCATGCGTGCCCGAAACCTGACCACAACAGCAGAAAGGTGGTTGTTTGCGAAGCATGTTCCGTGTCCATTGAGACCACCGGCCACCTCGGACAAGACGAGGAGGCGATCTTGCAGAAGCATCTCAAGTCTGGTAACTGCGATCCCACCAAGAAGAAGAAACCAATTTGCCCTGTTAAGAGATGCAAGGAAGTTTTGACGTTTTCCAACACCAGCACATGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTCCCTGCAGATCATGCTTGTAACAGAGGAGCTTCAGCTTCTTCCTCGGCTTCTGTTATTAATAGTCCATGGAGCAATCGGTTCTTGGCTGCTATGGCCAAGAGGAGTGGACAAGAATGTGCCAAAAATGGTGCAACTCGTTCTGGTTCTCCTCCCAGTACTCCTTCTGTTAAGGCCTATTGA 579 0.4922 MASGGTEAFPDLGKHCQHRDCNQLDFLPFTCDGCQQVFCVEHRSCKSHACPKPDHNSRKVVVCEACSVSIETTGHLGQDEEAILQKHLKSGNCDPTKKKKPICPVKRCKEVLTFSNTSTCKTCHIKVCLKHRFPADHACNRGASASSSASVINSPWSNRFLAAMAKRSGQECAKNGATRSGSPPSTPSVKAY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2210 192 MobiDBLite consensus disorder prediction 173 192 - -
Aed9g2210 192 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Aed9g2210 192 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Aed9g2210 192 Gene3D - 79 154 IPR035896 -
Aed9g2210 192 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Aed9g2210 192 SUPERFAMILY AN1-like Zinc finger 95 147 IPR035896 -
Aed9g2210 192 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Aed9g2210 192 SUPERFAMILY AN1-like Zinc finger 9 62 IPR035896 -
Aed9g2210 192 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Aed9g2210 192 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
Aed9g2210 192 MobiDBLite consensus disorder prediction 171 192 - -
Aed9g2210 192 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 168 - -
Aed9g2210 192 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 168 - -
Aed9g2210 192 Gene3D - 2 67 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2210 Aed-Chr9 25355772 25357593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2210 1 172 C2H2 Transcription Factor Family AT3G28210 60.465 3.84e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2210 - - gmx:100500384 366.311