Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2189 ATGGATCAGCATTTGATGATCATAAGTGATAAGACTGGTAATAATGAAGTTGAGATCATTGAAGCAGCGAGGATAGCTAATGCTCATGATTTTATTGCAAGCATGAAGGATGGTTATGACACATGGTGTGGAGATCATAGAGGGGTGCAACTATCTGGGGCCCAAAAACAAAGAATTGCAATAGCTAGGGCTGTGCTGAAGAACCCTAAAGTGTTTCTTTTGGATGAAGCTACAAGTGCACTTAATAGTCAATCGGAGAACGTGGTTCAAGATGCTTTGGAAAAGGTGATAGTTGGAAGGACTAGTGTGGTGGTCGCTCATAGGTTGAACAAAGGGAGAGTGGTAGAAGAAGGGTCTCATTCGCCTTTGTTGGCTAAAGGATCAAATAGGGGAATTAGGCCCTCCCCTCCCTCTTTTAAGTCACACAAGGAAAGGGACAAGACTAGACTTGGAATTGAGAACCATGTCTCAAATATGTGA 480 0.4271 MDQHLMIISDKTGNNEVEIIEAARIANAHDFIASMKDGYDTWCGDHRGVQLSGAQKQRIAIARAVLKNPKVFLLDEATSALNSQSENVVQDALEKVIVGRTSVVVAHRLNKGRVVEEGSHSPLLAKGSNRGIRPSPPSFKSHKERDKTRLGIENHVSNM 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2189 159 Pfam ABC transporter 21 79 IPR003439 GO:0005524
Aed9g2189 159 PANTHER ABC TRANSPORTER B FAMILY MEMBER 15 12 128 - -
Aed9g2189 159 Gene3D - 13 125 IPR027417 -
Aed9g2189 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 127 IPR027417 -
Aed9g2189 159 MobiDBLite consensus disorder prediction 117 159 - -
Aed9g2189 159 MobiDBLite consensus disorder prediction 137 152 - -
Aed9g2189 159 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 12 128 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2189 Aed-Chr9 25172416 25175283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2189 7 129 Calmodulin-binding Proteins AT2G36910 52.593 1.30e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2189 K05658 - gmx:100808766 186.422