Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2188 ATGATGCAGAGTGGCTTAATTTATCAAATCCTGGAAATCCCTAAGTGGAAAGAAGCATGTTTGGGGTGTTTGAGTGCAGTTTTATTCGGTGCAATTGAGCCACTTTATGCATTTGCAATGGGTTCCATGATATCAATTTTTTTCCTAAGAGATCATGATGAGATTAAAAGGAAAATTATAATGCATTCTCTATTTTTTGTAGGATTGGCTGTGTTTTCATTAGTTGTTAGGTCTTTAGTTGGAGATAAAATTGCACTATTGGCCATCAAATCCCAAGATGAAAGTAGCAAAATAGTCATTGAAGCTATTTCCAACTTTCGAACCATCACTCCATTTTCCTCACAAGACCGTGTCATAAAAATGCTAAAAAGGGCTCAAGAGGGACCAAGCTATGAATGCATTCGACAATCACACGGGCTTTCAAATATTGGTATGGTGGAAACCTTGTTTTCCATGTGGCTACATTACTCCAAAATCACGATTGTTTTAGTATTTGGAAATACAGGAAGGGTCATAGCAGATGCCATTGCCCTAGTTTTCTTAATCTTAAATAGAAACACACAAATAAATTCTGATGATGAAATGAACAGGTCCCAAGAACCCAATGTGATGATCTTCCAAGACTTGCCAATCAAAATTGAAGCAGGCAAATTAATCCAGAGCATTGGGCAAAGTGGGTGTGGCAAATCAACTATAATGGGCTTAATAGAGAGATTTTATGACCCACTTGAAGAGATAGTAATGATAGATGGTAAAGACATTAGGTCATACCACCTTAGGTCACTAAGGAACTACATTGCACTTTTGATCCAAGAGCCAACACTTTTTAAAGGGACCATATAA 843 0.3713 MMQSGLIYQILEIPKWKEACLGCLSAVLFGAIEPLYAFAMGSMISIFFLRDHDEIKRKIIMHSLFFVGLAVFSLVVRSLVGDKIALLAIKSQDESSKIVIEAISNFRTITPFSSQDRVIKMLKRAQEGPSYECIRQSHGLSNIGMVETLFSMWLHYSKITIVLVFGNTGRVIADAIALVFLILNRNTQINSDDEMNRSQEPNVMIFQDLPIKIEAGKLIQSIGQSGCGKSTIMGLIERFYDPLEEIVMIDGKDIRSYHLRSLRNYIALLIQEPTLFKGTI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2188 280 PANTHER ABC TRANSPORTER B FAMILY MEMBER 16-RELATED 198 280 - -
Aed9g2188 280 PANTHER ABC TRANSPORTER B FAMILY MEMBER 16-RELATED 84 175 - -
Aed9g2188 280 PANTHER ABC TRANSPORTER B FAMILY MEMBER 16-RELATED 12 76 - -
Aed9g2188 280 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 198 280 IPR039421 -
Aed9g2188 280 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 84 175 IPR039421 -
Aed9g2188 280 Gene3D ABC transporter type 1, transmembrane domain 6 194 IPR036640 GO:0005524|GO:0016021
Aed9g2188 280 Gene3D - 200 280 IPR027417 -
Aed9g2188 280 Pfam ABC transporter 207 279 IPR003439 GO:0005524
Aed9g2188 280 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 12 76 IPR039421 -
Aed9g2188 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2188 Aed-Chr9 25170475 25172400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2188 14 79 Calmodulin-binding Proteins AT2G36910 27.273 1.66e-06 47.4