Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2177 ATGGGAAGGCCTCCTTGTTGTGACAAATCCAATGTGAAGAGGGGTCTTTGGACTCCTGAGGAAGATGCTAAAATACTTGCCTATGTAGCCAATCATGGAACTGGAAACTGGACCTTGGTTCCAAAGAAAGCAGGGCTTAACAGGTGTGGTAAAAGCTGCAGGCTAAGATGGACCAACTACCTAAGGCCTGATCTCAAGCATGATGGTTTTACTCCCCAAGAAGAAGAACTCATTATTAATCTTCATGGAGCCATAGGAAGCAGATGGTCTTTAATAGCAAAAAGACTACCTGGGAGAACAGACAATGATGTCAAGAACTACTGGAACACAAAGCTAAGGAAGAAGCTTATGAAGTTGGGAATTGATCCAGTGACTCATAAGCCAGTATCACAAGTCCTCTCTGACTTGGGAAGCATTAGTGGCTTCCCAAACAACAACAACACCACCACTAACCAAATGGCTTTTGCCAACAAGGACTTGATGATGATCAACAACATGGTACCAACTAAAACTGAACAACCATCAGGTTCCAACAACACACAAGAGGGTCAAGTTCCCTCATACCAGATACCATACCAAGTCATCATCACCTCAGAAAATGTCCAACTCCAACCACATGTATTTAATGAAGCTGCATCCTCAACTTCATCCTCATCTTCCTCCAATCTCACACAATTAGGGTCACCACAGTCCTACTACTCTTACCAAACCCCTCCTCAGCCTCAAATTGCCCCTCCTAGTTCCTCCTCCTTTGATTGGAGTGAGTTTCTTCACAGTGACTCATTGATGTGGCCATCGAATCCCCCCTCAGGTCTAATGCTGCAAAGTGAGGCTGAGCTTTCCAACAATGCCAAAAGCAGCAATGGCCATCATGACATGCAAGGAGCTGCTGCAATTGAGGGTTCTGGTGCTGTTGCTTGTGGTGCAAGCATGGAACATCAAACTAACAACAAGCAGTACTGTGAAGGTCATTCATTTGTGGATGACATTTTGGACAGGGATAGTGAGATAAGAGCAGCATTCCCTGAACTTTTGGATGCTTCTTTTGACTACTGA 1056 0.446 MGRPPCCDKSNVKRGLWTPEEDAKILAYVANHGTGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHDGFTPQEEELIINLHGAIGSRWSLIAKRLPGRTDNDVKNYWNTKLRKKLMKLGIDPVTHKPVSQVLSDLGSISGFPNNNNTTTNQMAFANKDLMMINNMVPTKTEQPSGSNNTQEGQVPSYQIPYQVIITSENVQLQPHVFNEAASSTSSSSSSNLTQLGSPQSYYSYQTPPQPQIAPPSSSSFDWSEFLHSDSLMWPSNPPSGLMLQSEAELSNNAKSSNGHHDMQGAAAIEGSGAVACGASMEHQTNNKQYCEGHSFVDDILDRDSEIRAAFPELLDASFDY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2177 351 CDD SANT 70 112 IPR001005 -
Aed9g2177 351 CDD SANT 17 61 IPR001005 -
Aed9g2177 351 PANTHER F14D16.11-RELATED 1 351 - -
Aed9g2177 351 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed9g2177 351 Pfam Myb-like DNA-binding domain 70 110 IPR001005 -
Aed9g2177 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 116 IPR017930 -
Aed9g2177 351 Gene3D - 69 116 - -
Aed9g2177 351 MobiDBLite consensus disorder prediction 212 238 - -
Aed9g2177 351 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed9g2177 351 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aed9g2177 351 PANTHER F14D16.11-RELATED 1 351 - -
Aed9g2177 351 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aed9g2177 351 Gene3D - 7 67 - -
Aed9g2177 351 SMART sant 13 63 IPR001005 -
Aed9g2177 351 SMART sant 66 114 IPR001005 -
Aed9g2177 351 MobiDBLite consensus disorder prediction 212 250 - -
Aed9g2177 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2177 Aed-Chr9 25077393 25079261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2177 1 351 MYB Transcription Factor Family AT3G28470 46.381 1.17e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed9g2177 Myb_DNA-binding 4.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2177 K09422 - gmx:100815077 534.643