Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2168 ATGGTTTTCATTCTCGGTTCCTTTGATTATCGCCTCTCCGCACTAGAAACCGCGATGCGTCCCACTCAGATAAAAACACATTCAATTCGTAGTGCGCATGATAATATTGACAAGACTCTAAAAGCAGCAGAGGGGATTTTGTCACAATTCGATCAGACACGAATGGCGGAGGCTAAAATACTAAGAGGGCCACATGAGGATCTAGAAACCTATTTAGGAGCAATTGACCAATTGAGAGAAAATGTCCGTTTCTTTAGTAGTAAAAAGAGTTTCAAAAGTAGCGAAGGTGTCATTAACCATGCCAATAGCTTGCTTGCCAAAGCTATTAAACCAGTTGAACCTGATTGCCTTTTTGAGTGCCTACCAAACTCTCTAAGACCATCAAATTCTGGGAAGCAAAGTGACGGTGGTGGCAAAAGCCATTCTGATAAACAAAGTGCAGAAGCTATTACTTTTGCACTTCCAACTCTCATTCCACCCAGAGTTATACCTTTGCTACATGATTTAGCACAACAAATGGTTCAAGCTGGTCATCAACAACAACTCTTTCGAATGTATAGAGACACTCGTGCTTCAGTCCTAGAACAAAGTCTTAAAAAGTTAGGTGTCGAGAGGCTAAGTAAAGATGATGTTCAAAAAATGCAATGGGAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCGTTGAAAGCTCAATGTTTTGCTGAAGTCACTGCTGGTAGTGTCGCTATGCTTCTTAGTTTTGGGGAAGCTATTGCAAAAAGCAAGAGGTCACCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAAGTTCAACCAGAGTTTGAGAGACTTTTTGAAAGTAAAGCATGCAATGAAATGCGGGAAGCTGCAATGAATTTGACAAAGAGACTAGCTCAAACAGCCCAAGAAACCTTCATTGACTTTGAGGAAGCAGTTGAAAAAGATGCCACTAAAACTACTGTAATGGATGGAACTGTTCACCCTCTAACTAGCTATGTGATCAATTACGTGAAGTTTCTTTATGATTATCAATCAACTCTGAAACAACTTTTTCATGAGTTTGATCCTAATGATCCAGAAGGACAATTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAAGTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCCTTGACGCAATTGTTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGAAGAATTGTACAACAACATGCAAATCAATATAAAAGGATCTCTTGGGCAAAGATTTTGCAATGTCTCACTATTCCAGGAGTGGATAATAATAGTGGAGCTTCAAGAACAACGGTTAAAGATAGATTTAAGAGTTTTAACGATCAAATTGAGGAGATTCATGAAAGACAATCTCAATGGACTGTTCCTGATAGTGAATTGCGTGAATCTCTTCGATTGGCTGTTGCTGAAGTTTTGTTGCCTGCATATAGATCTTTCCTCAAACGTTTTGGGCCCATGATCGAGAATGGGAAAAATCCTCATAAGTACATCGTATATTCTCCTGAACATCTTGAGCAAATGTTGGGTGAATTTTTTGAAAGCAAGATTTGGGGTGAACAAAAGCGGTAA 1629 0.3843 MVFILGSFDYRLSALETAMRPTQIKTHSIRSAHDNIDKTLKAAEGILSQFDQTRMAEAKILRGPHEDLETYLGAIDQLRENVRFFSSKKSFKSSEGVINHANSLLAKAIKPVEPDCLFECLPNSLRPSNSGKQSDGGGKSHSDKQSAEAITFALPTLIPPRVIPLLHDLAQQMVQAGHQQQLFRMYRDTRASVLEQSLKKLGVERLSKDDVQKMQWEKICDQIFDGVDSLKAQCFAEVTAGSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMREVQPEFERLFESKACNEMREAAMNLTKRLAQTAQETFIDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEGQLAIITTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRRIVQQHANQYKRISWAKILQCLTIPGVDNNSGASRTTVKDRFKSFNDQIEEIHERQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPHKYIVYSPEHLEQMLGEFFESKIWGEQKR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2168 542 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 218 537 - -
Aed9g2168 542 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 217 - -
Aed9g2168 542 Pfam Exo70 exocyst complex subunit 218 529 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed9g2168 542 Gene3D Exocyst complex component Exo70 45 542 - -
Aed9g2168 542 Coils Coil 289 309 - -
Aed9g2168 542 SUPERFAMILY Cullin repeat-like 46 533 IPR016159 -
Aed9g2168 542 PANTHER EXOCYST COMPLEX PROTEIN EXO70 218 537 IPR004140 GO:0000145|GO:0006887
Aed9g2168 542 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 217 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2168 Aed-Chr9 24987023 24993270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2168 1 542 EXO70 exocyst subunit family AT5G52340 69.983 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2168 K07195 - gmx:100779774 959.903