Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2164 ATGGCTGACAAGGAAGAAGCCATGCATGCGGTTTTGAAGGAAGCTGTGGATTTGGTCCTTCGAGATGGGAAATGGATTGAGGAGGATGCTAGCATTCTTGTTCCGGGTGATATAATTAGTGTTAAGCTAGGGGATATTATCCCTGCTGATGCTCGTCTACTTGAAGGTGATCCACTGAAGATTGATCAGTCTGCACTTACAGGTGAGTCTCTTCCTGTCACGAAAGGTCCCGGTGATAGTGTTTATTCAGGCTCCACATGCAAGCAGGGAGAGATCAATGCAGTTGTTATCGCCACCGGAGTTCATACCTTCTTTGGCAAGGCTGCTCATCTTGTGGACTCCACAAATCAAGTTGGTCATTTTCAGAAGGTCCTGACTGCTATTGGAAACTTCTGCATATGTTCCATTGCTGTGGGAATGATAGTAGAGATCATTGTCATGTACCCGATTCAACATCGGGAATATCGTCCTGGGATTGACAATCTGCTTGTGCTTCTTATTGGAGGAATTCCTATTGCCATGCCTACTGTTTTGTCGGTGACAATGGCAATTGGATCCCATCGCTTAGCTCAGCAGGGTGCTATAACTAAAAGAATGACAGCAATAGAAGAGATGGCAGGAATGGATGTATTATGCAGTGACAAAACTGGAACTTTGACTTTGAACAAACTAACAGTTGACAAGAACCTTATTGAGGTTAGGATTGGATGGGGTTGGGCTGGTGTTGTTTGGCTTTACAACCTCATCTTTTATTTCCCACTTGATTTCATCAAGTTCGTGATTCGATATGCCTTGAGTGGAAGAGCTTGGGATCTTGTTATTGAACAAAGGATTGCTTTTACAAGGAAGAAAGATTTTGGAAAGGAAGAACGCGAACTTAAATGGGCGCATGCACAGAGGACACTTCATGGCCTTCACCCACCAGAGACTAAGTTCAATGAACGTACAAATTACACAGAACTTAATCAGATGGCTGAAGAGGCTAGAAGACGAGCAGAGATTGCAAGGCTGAGAGAACTGCATACACTGAAGGGCCATGTTGAGTCCGTGGTTAGACTAAAGGGTCTTGACATTGACACAATCCAGCAAGCATACACAGTCTAG 1104 0.442 MADKEEAMHAVLKEAVDLVLRDGKWIEEDASILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEINAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVRIGWGWAGVVWLYNLIFYFPLDFIKFVIRYALSGRAWDLVIEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKFNERTNYTELNQMAEEARRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2164 367 PANTHER CALCIUM-TRANSPORTING ATPASE 18 233 - -
Aed9g2164 367 PANTHER CALCIUM-TRANSPORTING ATPASE 235 347 - -
Aed9g2164 367 Gene3D - 316 367 - -
Aed9g2164 367 SUPERFAMILY Calcium ATPase, transduction domain A 18 112 IPR008250 -
Aed9g2164 367 SUPERFAMILY HAD-like 200 298 IPR036412 -
Aed9g2164 367 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 14 230 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed9g2164 367 Pfam E1-E2 ATPase 18 192 - -
Aed9g2164 367 Gene3D - 19 99 - -
Aed9g2164 367 Coils Coil 318 338 - -
Aed9g2164 367 PRINTS P-type cation-transporting ATPase superfamily signature 212 226 - -
Aed9g2164 367 PRINTS P-type cation-transporting ATPase superfamily signature 62 76 - -
Aed9g2164 367 SUPERFAMILY Calcium ATPase, transmembrane domain M 112 207 IPR023298 -
Aed9g2164 367 Gene3D - 209 223 IPR023214 -
Aed9g2164 367 ProSitePatterns E1-E2 ATPases phosphorylation site. 214 220 IPR018303 -
Aed9g2164 367 Gene3D - 100 208 - -
Aed9g2164 367 PANTHER PLASMA MEMBRANE ATPASE 18 233 - -
Aed9g2164 367 PANTHER PLASMA MEMBRANE ATPASE 235 347 - -
Aed9g2164 367 Gene3D - 224 233 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2164 Aed-Chr9 24931417 24940610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2164 235 367 Primary Pumps ATPases AT5G62670 83.582 1.85e-74 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2164 K01535 - sspl:121779079 426.017