Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g2161 ATGGGGTTTGGGAGTAATGCAGTTCAGGCTGGGAGTTTGGATGTGGACAAGTCAAAGGGAAAGAAGAAGAAGAAGAATGAAGGTGGTGGAAAAGAGAGAAAACGGTGGTTTAAACTTAGCTTATTTGGGAGCTGCATACCATCAGGATCAAAAGTTGATAGCACCATAAGTGGCACTACTAGTGCCCATAATGGTGAAAATGTCATCAAATCAATGATAGTTGTAGGGTCAGAGGAAAACAAATCTGCATCTGATACAATCACAAAGGTAACTGTTGCTCCTCAAGAGTCCTCTACAACAATTAGTGATGCGGAAAGTAATCCTTCCACCCCGAAGTTCAGCGAGGAGTTGAAGTTTGCTTCTTGTATGAGAAAATTCACATTCAATGGACTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGTGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGATGAGAATGGAACCGCACCTGTTAAACCAGGCACCGGCCTTACGGTTGCGGTCAAGACTCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAGTTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTACTGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGCCCTGAGGGGGAGAAGACACATGTATCGACAAGAGTTATGGGAACATATGGTTATGCTGCTCCTGAGTATGTGATGACTGTTGTCCTCATCACTGACTCGGCAACGCAATTGCTATTTTTGCAATTTGCATACACAAGTGTCAAGTGCCATTCATGCACATTTATATAA 870 0.4264 MGFGSNAVQAGSLDVDKSKGKKKKKNEGGGKERKRWFKLSLFGSCIPSGSKVDSTISGTTSAHNGENVIKSMIVVGSEENKSASDTITKVTVAPQESSTTISDAESNPSTPKFSEELKFASCMRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIDENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTVVLITDSATQLLFLQFAYTSVKCHSCTFI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g2161 289 ProSitePatterns Protein kinases ATP-binding region signature. 144 176 IPR017441 GO:0005524
Aed9g2161 289 ProSiteProfiles Protein kinase domain profile. 138 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed9g2161 289 Gene3D Phosphorylase Kinase; domain 1 122 218 - -
Aed9g2161 289 PANTHER OS01G0588500 PROTEIN-RELATED 66 221 - -
Aed9g2161 289 MobiDBLite consensus disorder prediction 1 32 - -
Aed9g2161 289 PANTHER RECEPTOR-LIKE KINASE PLANT 220 267 - -
Aed9g2161 289 MobiDBLite consensus disorder prediction 91 111 - -
Aed9g2161 289 PANTHER OS01G0588500 PROTEIN-RELATED 220 267 - -
Aed9g2161 289 SUPERFAMILY Protein kinase-like (PK-like) 113 261 IPR011009 -
Aed9g2161 289 PANTHER RECEPTOR-LIKE KINASE PLANT 66 221 - -
Aed9g2161 289 Pfam Protein tyrosine and serine/threonine kinase 142 217 IPR001245 GO:0004672|GO:0006468
Aed9g2161 289 Gene3D Transferase(Phosphotransferase) domain 1 219 269 - -
Aed9g2161 289 MobiDBLite consensus disorder prediction 15 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g2161 Aed-Chr9 24914686 24919319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g2161 220 267 Glycoside Hydrolase AT3G07070 72.917 1.16e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aed9g2161 PK_Tyr_Ser-Thr 2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g2161 - - gmx:100499647 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g2161 9 24914686 24919319 Aed3g0425 3 3024741 3026801 PCT